Literature DB >> 15324804

Protein motions promote catalysis.

Audrey Tousignant1, Joelle N Pelletier.   

Abstract

A relationship between molecular dynamics motions of noncatalytic residues and enzyme activity has recently been proposed. We present examples where mutations either near or distal from the active site residues modify internal enzyme motion with resulting modification of catalysis. A better understanding of internal protein motions correlated to catalysis will lead to a greater insight into enzyme function.

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Year:  2004        PMID: 15324804     DOI: 10.1016/j.chembiol.2004.06.007

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  34 in total

Review 1.  Structural and dynamic aspects of protein clocks: how can they be so slow and stable?

Authors:  Shuji Akiyama
Journal:  Cell Mol Life Sci       Date:  2012-01-25       Impact factor: 9.261

2.  Identification of slow correlated motions in proteins using residual dipolar and hydrogen-bond scalar couplings.

Authors:  Guillaume Bouvignies; Pau Bernadó; Sebastian Meier; Kyuil Cho; Stephan Grzesiek; Rafael Brüschweiler; Martin Blackledge
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-19       Impact factor: 11.205

3.  Coupling between catalytic site and collective dynamics: a requirement for mechanochemical activity of enzymes.

Authors:  Lee-Wei Yang; Ivet Bahar
Journal:  Structure       Date:  2005-06       Impact factor: 5.006

Review 4.  Multidimensional tunneling, recrossing, and the transmission coefficient for enzymatic reactions.

Authors:  Jingzhi Pu; Jiali Gao; Donald G Truhlar
Journal:  Chem Rev       Date:  2006-08       Impact factor: 60.622

5.  Native state energetics of the Src SH2 domain: evidence for a partially structured state in the denatured ensemble.

Authors:  David Wildes; L Meadow Anderson; Alex Sabogal; Susan Marqusee
Journal:  Protein Sci       Date:  2006-06-02       Impact factor: 6.725

6.  An inserted Gly residue fine tunes dynamics between mesophilic and thermophilic ribonucleases H.

Authors:  Joel A Butterwick; Arthur G Palmer
Journal:  Protein Sci       Date:  2006-11-06       Impact factor: 6.725

Review 7.  Control of oxygenation in lipoxygenase and cyclooxygenase catalysis.

Authors:  Claus Schneider; Derek A Pratt; Ned A Porter; Alan R Brash
Journal:  Chem Biol       Date:  2007-05

Review 8.  Atomic-scale dynamics inside living cells explored by neutron scattering.

Authors:  Marion Jasnin
Journal:  J R Soc Interface       Date:  2009-07-08       Impact factor: 4.118

9.  Conformational ensemble modulates cooperativity in the rate-determining catalytic step in the E1 component of the Escherichia coli pyruvate dehydrogenase multienzyme complex.

Authors:  Sachin Kale; Frank Jordan
Journal:  J Biol Chem       Date:  2009-09-29       Impact factor: 5.157

10.  Evolutionary basis for the coupled-domain motions in Thermus thermophilus leucyl-tRNA synthetase.

Authors:  Kristina Mary Ellen Weimer; Brianne Leigh Shane; Michael Brunetto; Sudeep Bhattacharyya; Sanchita Hati
Journal:  J Biol Chem       Date:  2009-02-02       Impact factor: 5.157

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