Literature DB >> 15324666

Lsm proteins promote regeneration of pre-mRNA splicing activity.

Loredana Verdone1, Silvia Galardi, David Page, Jean D Beggs.   

Abstract

Lsm proteins are ubiquitous, multifunctional proteins that affect the processing of most RNAs in eukaryotic cells, but their function is unknown. A complex of seven Lsm proteins, Lsm2-8, associates with the U6 small nuclear RNA (snRNA) that is a component of spliceosome complexes in which pre-mRNA splicing occurs. Spliceosomes contain five snRNAs, U1, U2, U4, U5, and U6, that are packaged as ribonucleoprotein particles (snRNPs). U4 and U6 snRNAs contain extensive sequence complementarity and interact to form U4/U6 di-snRNPs. U4/U6 di-snRNPs associate with U5 snRNPs to form U4/U6.U5 tri-snRNPs prior to spliceosome assembly. Within spliceosomes, disruption of base-paired U4/U6 heterodimer allows U6 snRNA to form part of the catalytic center. Following completion of the splicing reaction, snRNPs must be recycled for subsequent rounds of splicing, although little is known about this process. Here we present evidence that regeneration of splicing activity in vitro is dependent on Lsm proteins. RNP reconstitution experiments with exogenous U6 RNA show that Lsm proteins promote the formation of U6-containing complexes and suggest that Lsm proteins have a chaperone-like function, supporting the assembly or remodeling of RNP complexes involved in splicing. Such a function could explain the involvement of Lsm proteins in a wide variety of RNA processing pathways.

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Year:  2004        PMID: 15324666     DOI: 10.1016/j.cub.2004.08.032

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  32 in total

Review 1.  Evolutionary diversification of the Sm family of RNA-associated proteins.

Authors:  Douglas G Scofield; Michael Lynch
Journal:  Mol Biol Evol       Date:  2008-08-07       Impact factor: 16.240

2.  Substrate-assisted mechanism of RNP disruption by the spliceosomal Brr2 RNA helicase.

Authors:  Matthias Theuser; Claudia Höbartner; Markus C Wahl; Karine F Santos
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-27       Impact factor: 11.205

3.  The N- and C-terminal RNA recognition motifs of splicing factor Prp24 have distinct functions in U6 RNA binding.

Authors:  Sharon S Kwan; David A Brow
Journal:  RNA       Date:  2005-04-05       Impact factor: 4.942

4.  Spliceosomal small nuclear ribonucleoprotein particles repeatedly cycle through Cajal bodies.

Authors:  David Stanek; Jarmila Pridalová-Hnilicová; Ivan Novotný; Martina Huranová; Michaela Blazíková; Xin Wen; Aparna K Sapra; Karla M Neugebauer
Journal:  Mol Biol Cell       Date:  2008-03-26       Impact factor: 4.138

5.  Structure and conformational plasticity of the U6 small nuclear ribonucleoprotein core.

Authors:  Eric J Montemayor; Allison L Didychuk; Honghong Liao; Panzhou Hu; David A Brow; Samuel E Butcher
Journal:  Acta Crystallogr D Struct Biol       Date:  2017-01-01       Impact factor: 7.652

6.  3'-cyclic phosphorylation of U6 snRNA leads to recruitment of recycling factor p110 through LSm proteins.

Authors:  Konstantin Licht; Jan Medenbach; Reinhard Lührmann; Christian Kambach; Albrecht Bindereif
Journal:  RNA       Date:  2008-06-20       Impact factor: 4.942

7.  LSM1 over-expression in Saccharomyces cerevisiae depletes U6 snRNA levels.

Authors:  Natalie Luhtala; Roy Parker
Journal:  Nucleic Acids Res       Date:  2009-07-13       Impact factor: 16.971

8.  Structural basis for dual roles of Aar2p in U5 snRNP assembly.

Authors:  Gert Weber; Vanessa F Cristão; Karine F Santos; Sina Mozaffari Jovin; Anna C Heroven; Nicole Holton; Reinhard Lührmann; Jean D Beggs; Markus C Wahl
Journal:  Genes Dev       Date:  2013-02-26       Impact factor: 11.361

9.  Analysis of Lsm1p and Lsm8p domains in the cellular localization of Lsm complexes in budding yeast.

Authors:  Martin A M Reijns; Tatsiana Auchynnikava; Jean D Beggs
Journal:  FEBS J       Date:  2009-05-20       Impact factor: 5.542

10.  An analytical platform for mass spectrometry-based identification and chemical analysis of RNA in ribonucleoprotein complexes.

Authors:  Masato Taoka; Yoshio Yamauchi; Yuko Nobe; Shunpei Masaki; Hiroshi Nakayama; Hideaki Ishikawa; Nobuhiro Takahashi; Toshiaki Isobe
Journal:  Nucleic Acids Res       Date:  2009-11       Impact factor: 16.971

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