Literature DB >> 15306385

The use of gas-phase substrates to study enzyme catalysis at low hydration.

Rachel V Dunn1, Roy M Daniel.   

Abstract

Although there are varying estimates as to the degree of enzyme hydration required for activity, a threshold value of ca. 0.2 g of water per gram of protein has been widely accepted. The evidence upon which this is based is reviewed here. In particular, results from the use of gas-phase substrates are discussed. Results using solid-phase enzyme-substrate mixtures are not altogether in accord with those obtained using gas-phase substrates. The use of gaseous substrates and products provides an experimental system in which the hydration of the enzyme can be easily controlled, but which is not limited by diffusion. All the results show that increasing hydration enhances activity. The results using gas-phase substrates do not support the existence of a critical hydration value below which enzymatic activity is absent, and suggest that enzyme activity is possible at much lower hydrations than previously thought; they do not support the notion that significant hydration of the surface polar groups is required for activity. However, the marked improvement of activity as hydration is increased suggests that water does play a role, perhaps in optimizing the structure or facilitating the flexibility required for maximal activity.

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Year:  2004        PMID: 15306385      PMCID: PMC1693412          DOI: 10.1098/rstb.2004.1494

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  25 in total

1.  Tertiary and quaternary structures of photoreactive Fe-type nitrile hydratase from Rhodococcus sp. N-771: roles of hydration water molecules in stabilizing the structures and the structural origin of the substrate specificity of the enzyme.

Authors:  M Nakasako; M Odaka; M Yohda; N Dohmae; K Takio; N Kamiya; I Endo
Journal:  Biochemistry       Date:  1999-08-03       Impact factor: 3.162

2.  Direct transesterification of gases by "dry" immobilized lipase.

Authors:  Paula A Cameron; Brian H Davison; Paul D Frymier; John W Barton
Journal:  Biotechnol Bioeng       Date:  2002-05-05       Impact factor: 4.530

3.  Conserved positions for ribose recognition: importance of water bridging interactions among ATP, ADP and FAD-protein complexes.

Authors:  Mariana Babor; Vladimir Sobolev; Marvin Edelman
Journal:  J Mol Biol       Date:  2002-10-25       Impact factor: 5.469

4.  Water sorption isotherms and enthalpies of water sorption by lysozyme using the quartz crystal microbalance/heat conduction calorimeter.

Authors:  Allan L Smith; Hamid M Shirazi; S Rose Mulligan
Journal:  Biochim Biophys Acta       Date:  2002-01-31

5.  Lysozyme film hydration events: an ir and gravimetric study.

Authors:  G Careri; A Giansanti; E Gratton
Journal:  Biopolymers       Date:  1979-05       Impact factor: 2.505

6.  Alcoholysis catalyzed by Candida antarctica lipase B in a gas/solid system obeys a Ping Pong Bi Bi mechanism with competitive inhibition by the alcohol substrate and water.

Authors:  M P Bousquet-Dubouch; M Graber; N Sousa; S Lamare; M D Legoy
Journal:  Biochim Biophys Acta       Date:  2001-11-26

7.  Enzyme reaction rates at limited water activities.

Authors:  J J Skujins; A D McLaren
Journal:  Science       Date:  1967-12-22       Impact factor: 47.728

8.  Enzymatic dehalogenation of gas phase substrates with haloalkane dehalogenase.

Authors:  B C Dravis; K E LeJeune; A D Hetro; A J Russell
Journal:  Biotechnol Bioeng       Date:  2000-08-05       Impact factor: 4.530

9.  Water plays a different role on activation thermodynamic parameters of alcoholysis reaction catalyzed by lipase in gaseous and organic media.

Authors:  Marianne Graber; Marie Pierre Bousquet-Dubouch; Nadine Sousa; Sylvain Lamare; Marie Dominique Legoy
Journal:  Biochim Biophys Acta       Date:  2003-01-31

10.  [Solid-state enzymatic reactions. II. Chymotrypsin hydrolysis of N-succinyl-L-phenylalanine n-nitroanilide].

Authors:  Iu I Khurgin; P V Medvedeva; V Ia Rosliakov
Journal:  Biofizika       Date:  1977 Nov-Dec
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  3 in total

Review 1.  What can we learn by studying enzymes in non-aqueous media?

Authors:  Peter J Halling
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-08-29       Impact factor: 6.237

2.  Enzyme activity and flexibility at very low hydration.

Authors:  V Kurkal; R M Daniel; John L Finney; M Tehei; R V Dunn; Jeremy C Smith
Journal:  Biophys J       Date:  2005-05-13       Impact factor: 4.033

3.  Lone pair ... pi interactions between water oxygens and aromatic residues: quantum chemical studies based on high-resolution protein structures and model compounds.

Authors:  Alok Jain; Venkatnarayan Ramanathan; Ramasubbu Sankararamakrishnan
Journal:  Protein Sci       Date:  2009-03       Impact factor: 6.725

  3 in total

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