Literature DB >> 15299625

Cryocrystallography of 3-Isopropylmalate dehydrogenase from Thermus thermophilus and its chimeric enzyme.

C Nagata1, H Moriyama, N Tanaka, M Nakasako, M Yamamoto, T Ueki, T Oshima.   

Abstract

The crystal structures of thermostable enzyme, 3-isopropylmalate dehydrogenase of Thermus thermophilus (10T) and a chimeric enzyme between T. thermophilus and Bacillus subtilus with one point mutation (cS82R), were determined at both 100 and 150 K. At the cryogenic condition, the volume of the unit cell decreased by 5% as a result of a contraction in the solvent region. Although the overall structures of both enzymes at low temperature were the same as that of 10T at room temperature, interactions between two domains and between two subunits in a functional dimer of cS82R were significantly altered. The decrease in the average temperature factor of 10T at low temperature and no significant decrease for cS82R suggested that the structure of the engineered enzyme (cS82R) may have many conformational substates even at low temperature, while the native enzyme (10T) at low temperature has a more definite conformation than that at room temperature. The location of water molecules around the enzyme molecule and the calculation of the radii of gyration suggested that cS82R had a weaker hydration than 10T.

Entities:  

Year:  1996        PMID: 15299625     DOI: 10.1107/S0907444995016623

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  4 in total

1.  Crystallization and preliminary X-ray diffraction analysis of various enzyme-substrate complexes of isopropylmalate dehydrogenase from Thermus thermophilus.

Authors:  Angelo Merli; Karuppasamy Manikandan; Eva Gráczer; Linda Schuldt; Rajesh Kumar Singh; Péter Závodszky; Mária Vas; Manfred S Weiss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-05-29

2.  Temperature-dependent macromolecular X-ray crystallography.

Authors:  Martin Weik; Jacques Philippe Colletier
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

Review 3.  Bacterial Branched-Chain Amino Acid Biosynthesis: Structures, Mechanisms, and Drugability.

Authors:  Tathyana M Amorim Franco; John S Blanchard
Journal:  Biochemistry       Date:  2017-11-07       Impact factor: 3.162

4.  Deciphering the Dynamics of Non-Covalent Interactions Affecting Thermal Stability of a Protein: Molecular Dynamics Study on Point Mutant of Thermus thermophilus Isopropylmalate Dehydrogenase.

Authors:  Reetu Sharma; G Narahari Sastry
Journal:  PLoS One       Date:  2015-12-11       Impact factor: 3.240

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.