Literature DB >> 15296931

A new perspective on thiamine catalysis.

Martina Pohl1, Georg A Sprenger, Michael Müller.   

Abstract

Our knowledge of thiamine-catalyzed ligase and lyase reactions has entered a new dimension. Significant achievements have been made in the field of enzymatic catalysis with the detection of hitherto unknown reaction types - extending the synthetic potential of known thiamine diphosphate (ThDP)-dependent enzymes - and the identification and characterization of new enzymes. As we learn more about ThDP-dependent enzymes, we find an ever-expanding range of reactions that they are able to catalyze and see increased amino acid sequence heterogeneity. By contrast, the three-dimensional structures of these enzymes, so far, seem to be highly similar. Non-enzymatic thiazolium and triazolium catalysts have also been developed, enhancing the scope of acyl anion chemistry.

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Year:  2004        PMID: 15296931     DOI: 10.1016/j.copbio.2004.06.002

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  36 in total

Review 1.  On the origin of biochemistry at an alkaline hydrothermal vent.

Authors:  William Martin; Michael J Russell
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2007-10-29       Impact factor: 6.237

Review 2.  Thiamine: a key nutrient for yeasts during wine alcoholic fermentation.

Authors:  Pwj Labuschagne; B Divol
Journal:  Appl Microbiol Biotechnol       Date:  2021-01-06       Impact factor: 4.813

3.  Purification, crystallization and preliminary X-ray diffraction analysis of the thiaminase type II from Staphylococcus aureus.

Authors:  Afshan Begum; Julia Drebes; Markus Perbandt; Carsten Wrenger; Christian Betzel
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-12-21

Review 4.  Experimental observation of thiamin diphosphate-bound intermediates on enzymes and mechanistic information derived from these observations.

Authors:  Frank Jordan; Natalia S Nemeria
Journal:  Bioorg Chem       Date:  2005-04-01       Impact factor: 5.275

5.  Cyclohexane-1,2-dione hydrolase from denitrifying Azoarcus sp. strain 22Lin, a novel member of the thiamine diphosphate enzyme family.

Authors:  Alma K Steinbach; Sonja Fraas; Jens Harder; Anja Tabbert; Henner Brinkmann; Axel Meyer; Ulrich Ermler; Peter M H Kroneck
Journal:  J Bacteriol       Date:  2011-09-30       Impact factor: 3.490

6.  The Thiamine diphosphate dependent Enzyme Engineering Database: a tool for the systematic analysis of sequence and structure relations.

Authors:  Michael Widmann; Robert Radloff; Jürgen Pleiss
Journal:  BMC Biochem       Date:  2010-02-01       Impact factor: 4.059

7.  Modeling of pyruvate decarboxylases from ethanol producing bacteria.

Authors:  Anjala Shrestha; Srisuda Dhamwichukorn; Ekachai Jenwitheesuk
Journal:  Bioinformation       Date:  2010-02-28

8.  Catalytic activity of the anaerobic tyrosine lyase required for thiamine biosynthesis in Escherichia coli.

Authors:  Martin R Challand; Filipa T Martins; Peter L Roach
Journal:  J Biol Chem       Date:  2009-11-18       Impact factor: 5.157

9.  Probing the active center of benzaldehyde lyase with substitutions and the pseudosubstrate analogue benzoylphosphonic acid methyl ester.

Authors:  Gabriel S Brandt; Natalia Nemeria; Sumit Chakraborty; Michael J McLeish; Alejandra Yep; George L Kenyon; Gregory A Petsko; Frank Jordan; Dagmar Ringe
Journal:  Biochemistry       Date:  2008-06-21       Impact factor: 3.162

10.  The vitamin B1 metabolism of Staphylococcus aureus is controlled at enzymatic and transcriptional levels.

Authors:  Ingrid B Müller; Bärbel Bergmann; Matthew R Groves; Isabel Couto; Leonard Amaral; Tadhg P Begley; Rolf D Walter; Carsten Wrenger
Journal:  PLoS One       Date:  2009-11-03       Impact factor: 3.240

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