Literature DB >> 19923213

Catalytic activity of the anaerobic tyrosine lyase required for thiamine biosynthesis in Escherichia coli.

Martin R Challand1, Filipa T Martins, Peter L Roach.   

Abstract

Thiazole synthase in Escherichia coli is an alphabeta heterodimer of ThiG and ThiH. ThiH is a tyrosine lyase that cleaves the C alpha-C beta bond of tyrosine, generating p-cresol as a by-product, to form dehydroglycine. This reactive intermediate acts as one of three substrates for the thiazole cyclization reaction catalyzed by ThiG. ThiH is a radical S-adenosylmethionine (AdoMet) enzyme that utilizes a [4Fe-4S](+) cluster to reductively cleave AdoMet, forming methionine and a 5'-deoxyadenosyl radical. Analysis of the time-dependent formation of the reaction products 5'-deoxyadenosine (DOA) and p-cresol has demonstrated catalytic behavior of the tyrosine lyase. The kinetics of product formation showed a pre-steady state burst phase, and the involvement of DOA in product inhibition was identified by the addition of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase to activity assays. This hydrolyzed the DOA and changed the rate-determining step but, in addition, substantially increased the uncoupled turnover of AdoMet. Addition of glyoxylate and ammonium inhibited the tyrosine cleavage reaction, but the reductive cleavage of AdoMet continued in an uncoupled manner. Tyrosine analogues were incubated with ThiGH, which showed a strong preference for phenolic substrates. 4-Hydroxyphenylpropionic acid analogues allowed uncoupled AdoMet cleavage but did not result in further reaction (C alpha-C beta bond cleavage). The results of the substrate analogue studies and the product inhibition can be explained by a mechanistic hypothesis involving two reaction pathways, a product-forming pathway and a futile cycle.

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Year:  2009        PMID: 19923213      PMCID: PMC2820752          DOI: 10.1074/jbc.M109.056606

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  31 in total

1.  Biosynthesis of thiamin thiazole: determination of the regiochemistry of the S/O acyl shift by using 1,4-dideoxy-D-xylulose-5-phosphate.

Authors:  Abhishek Chatterjee; Xuemei Han; Fred W McLafferty; Tadhg P Begley
Journal:  Angew Chem Int Ed Engl       Date:  2006-05-19       Impact factor: 15.336

2.  Thiazole synthase from Escherichia coli: an investigation of the substrates and purified proteins required for activity in vitro.

Authors:  Marco Kriek; Filipa Martins; Roberta Leonardi; Shirley A Fairhurst; David J Lowe; Peter L Roach
Journal:  J Biol Chem       Date:  2007-04-02       Impact factor: 5.157

3.  Thiamin phosphate synthase: the rate of pyrimidine carbocation formation.

Authors:  Jeremiah W Hanes; Steven E Ealick; Tadhg P Begley
Journal:  J Am Chem Soc       Date:  2007-03-28       Impact factor: 15.419

4.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

Review 5.  S-adenosylmethionine as an oxidant: the radical SAM superfamily.

Authors:  Susan C Wang; Perry A Frey
Journal:  Trends Biochem Sci       Date:  2007-02-08       Impact factor: 13.807

6.  Cloning and expression of Escherichia coli 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase: identification of the pfs gene product.

Authors:  K A Cornell; M K Riscoe
Journal:  Biochim Biophys Acta       Date:  1998-03-04

7.  Mutational analysis of ThiH, a member of the radical S-adenosylmethionine (AdoMet) protein superfamily.

Authors:  Norma C Martinez-Gomez; Matt Robers; Diana M Downs
Journal:  J Biol Chem       Date:  2004-07-22       Impact factor: 5.157

8.  Characterisation of flavodoxin NADP+ oxidoreductase and flavodoxin; key components of electron transfer in Escherichia coli.

Authors:  L McIver; C Leadbeater; D J Campopiano; R L Baxter; S N Daff; S K Chapman; A W Munro
Journal:  Eur J Biochem       Date:  1998-11-01

9.  Binding energy in the one-electron reductive cleavage of S-adenosylmethionine in lysine 2,3-aminomutase, a radical SAM enzyme.

Authors:  Susan C Wang; Perry A Frey
Journal:  Biochemistry       Date:  2007-10-18       Impact factor: 3.162

10.  Pre-steady-state kinetic analysis of cAMP-dependent protein kinase using rapid quench flow techniques.

Authors:  B D Grant; J A Adams
Journal:  Biochemistry       Date:  1996-02-13       Impact factor: 3.162

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  21 in total

1.  The thiamine biosynthetic enzyme ThiC catalyzes multiple turnovers and is inhibited by S-adenosylmethionine (AdoMet) metabolites.

Authors:  Lauren D Palmer; Diana M Downs
Journal:  J Biol Chem       Date:  2013-09-06       Impact factor: 5.157

Review 2.  Radical S-adenosylmethionine (SAM) enzymes in cofactor biosynthesis: a treasure trove of complex organic radical rearrangement reactions.

Authors:  Angad P Mehta; Sameh H Abdelwahed; Nilkamal Mahanta; Dmytro Fedoseyenko; Benjamin Philmus; Lisa E Cooper; Yiquan Liu; Isita Jhulki; Steven E Ealick; Tadhg P Begley
Journal:  J Biol Chem       Date:  2014-12-04       Impact factor: 5.157

Review 3.  Radical SAM enzymes involved in the biosynthesis of purine-based natural products.

Authors:  Vahe Bandarian
Journal:  Biochim Biophys Acta       Date:  2012-08-03

4.  Identification of a cyclic nucleotide as a cryptic intermediate in molybdenum cofactor biosynthesis.

Authors:  Bradley M Hover; Anna Loksztejn; Anthony A Ribeiro; Kenichi Yokoyama
Journal:  J Am Chem Soc       Date:  2013-04-29       Impact factor: 15.419

Review 5.  Radical S-adenosylmethionine enzymes.

Authors:  Joan B Broderick; Benjamin R Duffus; Kaitlin S Duschene; Eric M Shepard
Journal:  Chem Rev       Date:  2014-01-29       Impact factor: 60.622

Review 6.  Thiamin biosynthesis: still yielding fascinating biological chemistry.

Authors:  Tadhg P Begley; Steven E Ealick; Fred W McLafferty
Journal:  Biochem Soc Trans       Date:  2012-06-01       Impact factor: 5.407

Review 7.  Methylthioadenosine/S-adenosylhomocysteine nucleosidase, a critical enzyme for bacterial metabolism.

Authors:  Nikhat Parveen; Kenneth A Cornell
Journal:  Mol Microbiol       Date:  2010-11-18       Impact factor: 3.501

8.  Biosynthesis of the [FeFe] Hydrogenase H Cluster: A Central Role for the Radical SAM Enzyme HydG.

Authors:  Daniel L M Suess; Jon M Kuchenreuther; Liliana De La Paz; James R Swartz; R David Britt
Journal:  Inorg Chem       Date:  2015-12-24       Impact factor: 5.165

Review 9.  C-C bond forming radical SAM enzymes involved in the construction of carbon skeletons of cofactors and natural products.

Authors:  Kenichi Yokoyama; Edward A Lilla
Journal:  Nat Prod Rep       Date:  2018-07-18       Impact factor: 13.423

10.  EPR Spectroscopic Studies of [FeFe]-Hydrogenase Maturation.

Authors:  Daniel L M Suess; R David Britt
Journal:  Catal Letters       Date:  2015-07-30       Impact factor: 3.186

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