Literature DB >> 15294429

Thermodynamical interpretation of evolutionary dynamics on a fitness landscape in a evolution reactor, I.

Takuyo Aita1, Shunichi Morinaga, Yuzuru Husimi.   

Abstract

A theory for describing evolution as adaptive walks by a finite population with M walkers (M > or = 1) on an anisotropic Mt. Fuji-type fitness landscape is presented, from a thermodynamical point of view. Introducing the 'free fitness' as the sum of a fitness term and an entropy term and 'evolutionary force' as the gradient of free fitness on a fitness coordinate, we demonstrate that the behavior of these theoretical walkers is almost consistent with the thermodynamical schemes. The major conclusions are as follows: (1) an adaptive walk (=evolution) is driven by an evolutionary force in the direction in which free fitness increases; (2) the expectation of the climbing rate obeys an equation analogous to the Einstein relation in Brownian motion; (3) the standard deviation of the climbing rate is a quantity analogous to the mean thermal energy of a particle, kT (x constant). In addition, on the interpretation that the walkers climb the landscape by absorbing 'fitness information' from the surroundings, we succeeded in quantifying the fitness information and formulating a macroscopic scheme from an informational point of view.

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Year:  2004        PMID: 15294429     DOI: 10.1016/j.bulm.2004.01.004

Source DB:  PubMed          Journal:  Bull Math Biol        ISSN: 0092-8240            Impact factor:   1.758


  3 in total

1.  The statistical mechanics of a polygenic character under stabilizing selection, mutation and drift.

Authors:  Harold P de Vladar; Nick H Barton
Journal:  J R Soc Interface       Date:  2010-11-17       Impact factor: 4.118

Review 2.  Biomolecular information gained through in vitro evolution.

Authors:  Takuyo Aita; Yuzuru Husimi
Journal:  Biophys Rev       Date:  2009-12-15

3.  Experimental rugged fitness landscape in protein sequence space.

Authors:  Yuuki Hayashi; Takuyo Aita; Hitoshi Toyota; Yuzuru Husimi; Itaru Urabe; Tetsuya Yomo
Journal:  PLoS One       Date:  2006-12-20       Impact factor: 3.240

  3 in total

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