Literature DB >> 15291577

Spectroscopic and computational studies of Co2+corrinoids: spectral and electronic properties of the biologically relevant base-on and base-off forms of Co2+cobalamin.

Troy A Stich1, Nicole R Buan, Thomas C Brunold.   

Abstract

Co(2+)cobalmain (Co(2+)Cbl) is implicated in the catalytic cycles of all adenosylcobalamin (AdoCbl)-dependent enzymes, as in each case catalysis is initiated through homolytic cleavage of the cofactor's Co-C bond. The rate of Co-C bond homolysis, while slow for the free cofactor, is accelerated by 12 orders of magnitude when AdoCbl is bound to the protein active site, possibly through enzyme-mediated stabilization of the post-homolysis products. As an essential step toward the elucidation of the mechanism of enzymatic Co-C bond activation, we employed electronic absorption (Abs), magnetic circular dichroism (MCD), and resonance Raman spectroscopies to characterize the electronic excited states of Co(2+)Cbl and Co(2+)cobinamide (Co(2+)Cbi(+), a cobalamin derivative that lacks the nucleotide loop and 5,6-dimethylbenzimazole (DMB) base and instead binds a water molecule in the lower axial position). Although relatively modest differences exist between the Abs spectra of these two Co(2+)corrinoid species, MCD data reveal that substitution of the lower axial ligand gives rise to dramatic changes in the low-energy region where Co(2+)-centered ligand field transitions are expected to occur. Our quantitative analysis of these spectral changes within the framework of time-dependent density functional theory (TD-DFT) calculations indicates that corrin-based pi --> pi transitions, which dominate the Co(2+)corrinoid Abs spectra, are essentially insulated from perturbations of the lower ligand environment. Contrastingly, the Co(2+)-centered ligand field transitions, which are observed here for the first time using MCD spectroscopy, are extremely sensitive to alterations in the Co(2+) ligand environment and thus may serve as excellent reporters of enzyme-induced perturbations of the Co(2+) state. The power of this combined spectroscopic/computational methodology for studying Co(2+)corrinoid/enzyme active site interactions is demonstrated by the dramatic changes in the MCD spectrum as Co(2+)Cbi(+) binds to the adenosyltransferase CobA.

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Year:  2004        PMID: 15291577     DOI: 10.1021/ja0481631

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  32 in total

1.  Computational study on the difference between the Co-C bond dissociation energy in methylcobalamin and adenosylcobalamin.

Authors:  Nicole Dölker; Antonio Morreale; Feliu Maseras
Journal:  J Biol Inorg Chem       Date:  2005-09-23       Impact factor: 3.358

Review 2.  Multiple roles of ATP:cob(I)alamin adenosyltransferases in the conversion of B12 to coenzyme B12.

Authors:  Paola E Mera; Jorge C Escalante-Semerena
Journal:  Appl Microbiol Biotechnol       Date:  2010-07-31       Impact factor: 4.813

3.  Structural insights into the mechanism of four-coordinate Cob(II)alamin formation in the active site of the Salmonella enterica ATP:Co(I)rrinoid adenosyltransferase enzyme: critical role of residues Phe91 and Trp93.

Authors:  Theodore C Moore; Sean A Newmister; Ivan Rayment; Jorge C Escalante-Semerena
Journal:  Biochemistry       Date:  2012-11-21       Impact factor: 3.162

4.  Catalytic effect of riboflavin on electron transfer from NADH to aquacobalamin.

Authors:  Ilia A Dereven'kov; Luciana Hannibal; Sergei V Makarov; Pavel A Molodtsov
Journal:  J Biol Inorg Chem       Date:  2019-11-26       Impact factor: 3.358

5.  Unprecedented Mechanism Employed by the Salmonella enterica EutT ATP:Co(I)rrinoid Adenosyltransferase Precludes Adenosylation of Incomplete Co(II)rrinoids.

Authors:  Kiyoung Park; Paola E Mera; Theodore C Moore; Jorge C Escalante-Semerena; Thomas C Brunold
Journal:  Angew Chem Int Ed Engl       Date:  2015-04-27       Impact factor: 15.336

6.  Spectroscopic Study of the EutT Adenosyltransferase from Listeria monocytogenes: Evidence for the Formation of a Four-Coordinate Cob(II)alamin Intermediate.

Authors:  Nuru G Stracey; Flavia G Costa; Jorge C Escalante-Semerena; Thomas C Brunold
Journal:  Biochemistry       Date:  2018-08-16       Impact factor: 3.162

7.  Spectroscopic and computational characterization of the base-off forms of cob(II)alamin.

Authors:  Matthew D Liptak; Angela S Fleischhacker; Rowena G Matthews; Joshua Telser; Thomas C Brunold
Journal:  J Phys Chem B       Date:  2009-04-16       Impact factor: 2.991

Review 8.  Cobalamin-dependent and cobamide-dependent methyltransferases.

Authors:  Rowena G Matthews; Markos Koutmos; Supratim Datta
Journal:  Curr Opin Struct Biol       Date:  2008-12       Impact factor: 6.809

9.  Kinetic and spectroscopic studies of the ATP:corrinoid adenosyltransferase PduO from Lactobacillus reuteri: substrate specificity and insights into the mechanism of Co(II)corrinoid reduction.

Authors:  Kiyoung Park; Paola E Mera; Jorge C Escalante-Semerena; Thomas C Brunold
Journal:  Biochemistry       Date:  2008-08-02       Impact factor: 3.162

10.  Dihydroflavin-driven adenosylation of 4-coordinate Co(II) corrinoids: are cobalamin reductases enzymes or electron transfer proteins?

Authors:  Paola E Mera; Jorge C Escalante-Semerena
Journal:  J Biol Chem       Date:  2009-11-21       Impact factor: 5.157

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