Literature DB >> 18672897

Kinetic and spectroscopic studies of the ATP:corrinoid adenosyltransferase PduO from Lactobacillus reuteri: substrate specificity and insights into the mechanism of Co(II)corrinoid reduction.

Kiyoung Park1, Paola E Mera, Jorge C Escalante-Semerena, Thomas C Brunold.   

Abstract

The PduO-type ATP:corrinoid adenosyltransferase from Lactobacillus reuteri ( LrPduO) catalyzes the formation of the essential Co-C bond of adenosylcobalamin (coenzyme B 12) by transferring the adenosyl group from cosubstrate ATP to a transient Co (1+)corrinoid species generated in the enzyme active site. While PduO-type enzymes have previously been believed to be capable of adenosylating only Co (1+)cobalamin (Co (1+)Cbl (-)), our kinetic data obtained in this study provide in vitro evidence that LrPduO can in fact also utilize the incomplete corrinoid Co (1+)cobinamide (Co (1+)Cbi) as an alternative substrate. To explore the mechanism by which LrPduO overcomes the thermodynamically challenging reduction of its Co (2+)corrinoid substrates, we have examined how the enzyme active site alters the geometric and electronic properties of Co (2+)Cbl and Co (2+)Cbi (+) by using electronic absorption, magnetic circular dichroism, and electron paramagnetic resonance spectroscopic techniques. Our data reveal that upon binding to LrPduO that was preincubated with ATP, both Co (2+)corrinoids undergo a partial ( approximately 40-50%) conversion to distinct paramagnetic Co (2+) species. The spectroscopic signatures of these species are consistent with essentially four-coordinate, square-planar Co (2+) complexes, based on a comparison with the results obtained in our previous studies of related enzymes. Consequently, it appears that the general strategy employed by adenosyltransferases for effecting Co (2+) --> Co (1+) reduction involves the formation of an "activated" Co (2+)corrinoid intermediate that lacks any significant axial bonding interactions, to stabilize the redox-active, Co 3d z (2) -based molecular orbital.

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Year:  2008        PMID: 18672897      PMCID: PMC2574751          DOI: 10.1021/bi800419e

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  38 in total

1.  Biochemical evidence that the pduS gene encodes a bifunctional cobalamin reductase.

Authors:  Edith M Sampson; Celeste L V Johnson; Thomas A Bobik
Journal:  Microbiology       Date:  2005-04       Impact factor: 2.777

2.  cobA function is required for both de novo cobalamin biosynthesis and assimilation of exogenous corrinoids in Salmonella typhimurium.

Authors:  J C Escalante-Semerena; S J Suh; J R Roth
Journal:  J Bacteriol       Date:  1990-01       Impact factor: 3.490

3.  The defect in the cbl B class of human methylmalonic acidemia: deficiency of cob(I)alamin adenosyltransferase activity in extracts of cultured fibroblasts.

Authors:  W A Fenton; L E Rosenberg
Journal:  Biochem Biophys Res Commun       Date:  1981-01-15       Impact factor: 3.575

4.  Role of the dimethylbenzimidazole tail in the reaction catalyzed by coenzyme B12-dependent methylmalonyl-CoA mutase.

Authors:  S Chowdhury; R Banerjee
Journal:  Biochemistry       Date:  1999-11-16       Impact factor: 3.162

5.  Thermodynamic and kinetic characterization of Co-C bond homolysis catalyzed by coenzyme B(12)-dependent methylmalonyl-CoA mutase.

Authors:  S Chowdhury; R Banerjee
Journal:  Biochemistry       Date:  2000-07-11       Impact factor: 3.162

6.  Coupling of cobalt-carbon bond homolysis and hydrogen atom abstraction in adenosylcobalamin-dependent glutamate mutase.

Authors:  E N Marsh; D P Ballou
Journal:  Biochemistry       Date:  1998-08-25       Impact factor: 3.162

7.  cobU-dependent assimilation of nonadenosylated cobinamide in cobA mutants of Salmonella typhimurium.

Authors:  G A O'Toole; J C Escalante-Semerena
Journal:  J Bacteriol       Date:  1993-10       Impact factor: 3.490

8.  Characterisation of flavodoxin NADP+ oxidoreductase and flavodoxin; key components of electron transfer in Escherichia coli.

Authors:  L McIver; C Leadbeater; D J Campopiano; R L Baxter; S N Daff; S K Chapman; A W Munro
Journal:  Eur J Biochem       Date:  1998-11-01

9.  Human ATP:Cob(I)alamin adenosyltransferase and its interaction with methionine synthase reductase.

Authors:  Nicole A Leal; Horatiu Olteanu; Ruma Banerjee; Thomas A Bobik
Journal:  J Biol Chem       Date:  2004-08-30       Impact factor: 5.157

10.  Purification and initial characterization of the ATP:corrinoid adenosyltransferase encoded by the cobA gene of Salmonella typhimurium.

Authors:  S Suh; J C Escalante-Semerena
Journal:  J Bacteriol       Date:  1995-02       Impact factor: 3.490

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  20 in total

1.  Spectroscopic Studies of the EutT Adenosyltransferase from Salmonella enterica: Evidence of a Tetrahedrally Coordinated Divalent Transition Metal Cofactor with Cysteine Ligation.

Authors:  Ivan G Pallares; Theodore C Moore; Jorge C Escalante-Semerena; Thomas C Brunold
Journal:  Biochemistry       Date:  2017-01-03       Impact factor: 3.162

2.  Loss of allostery and coenzyme B12 delivery by a pathogenic mutation in adenosyltransferase.

Authors:  Michael Lofgren; Ruma Banerjee
Journal:  Biochemistry       Date:  2011-06-02       Impact factor: 3.162

3.  Cofactor Editing by the G-protein Metallochaperone Domain Regulates the Radical B12 Enzyme IcmF.

Authors:  Zhu Li; Kenichi Kitanishi; Umar T Twahir; Valentin Cracan; Derrell Chapman; Kurt Warncke; Ruma Banerjee
Journal:  J Biol Chem       Date:  2017-01-27       Impact factor: 5.157

Review 4.  Multiple roles of ATP:cob(I)alamin adenosyltransferases in the conversion of B12 to coenzyme B12.

Authors:  Paola E Mera; Jorge C Escalante-Semerena
Journal:  Appl Microbiol Biotechnol       Date:  2010-07-31       Impact factor: 4.813

5.  Structural insights into the mechanism of four-coordinate Cob(II)alamin formation in the active site of the Salmonella enterica ATP:Co(I)rrinoid adenosyltransferase enzyme: critical role of residues Phe91 and Trp93.

Authors:  Theodore C Moore; Sean A Newmister; Ivan Rayment; Jorge C Escalante-Semerena
Journal:  Biochemistry       Date:  2012-11-21       Impact factor: 3.162

6.  Residue Phe112 of the human-type corrinoid adenosyltransferase (PduO) enzyme of Lactobacillus reuteri is critical to the formation of the four-coordinate Co(II) corrinoid substrate and to the activity of the enzyme.

Authors:  Paola E Mera; Martin St Maurice; Ivan Rayment; Jorge C Escalante-Semerena
Journal:  Biochemistry       Date:  2009-04-14       Impact factor: 3.162

7.  Unprecedented Mechanism Employed by the Salmonella enterica EutT ATP:Co(I)rrinoid Adenosyltransferase Precludes Adenosylation of Incomplete Co(II)rrinoids.

Authors:  Kiyoung Park; Paola E Mera; Theodore C Moore; Jorge C Escalante-Semerena; Thomas C Brunold
Journal:  Angew Chem Int Ed Engl       Date:  2015-04-27       Impact factor: 15.336

8.  Spectroscopic Study of the EutT Adenosyltransferase from Listeria monocytogenes: Evidence for the Formation of a Four-Coordinate Cob(II)alamin Intermediate.

Authors:  Nuru G Stracey; Flavia G Costa; Jorge C Escalante-Semerena; Thomas C Brunold
Journal:  Biochemistry       Date:  2018-08-16       Impact factor: 3.162

9.  Spectroscopic and computational characterization of the base-off forms of cob(II)alamin.

Authors:  Matthew D Liptak; Angela S Fleischhacker; Rowena G Matthews; Joshua Telser; Thomas C Brunold
Journal:  J Phys Chem B       Date:  2009-04-16       Impact factor: 2.991

10.  Dihydroflavin-driven adenosylation of 4-coordinate Co(II) corrinoids: are cobalamin reductases enzymes or electron transfer proteins?

Authors:  Paola E Mera; Jorge C Escalante-Semerena
Journal:  J Biol Chem       Date:  2009-11-21       Impact factor: 5.157

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