Literature DB >> 15290323

Halobacterium noricense sp. nov., an archaeal isolate from a bore core of an alpine Permian salt deposit, classification of Halobacterium sp. NRC-1 as a strain of H. salinarum and emended description of H. salinarum.

Claudia Gruber1, Andrea Legat, Marion Pfaffenhuemer, Christian Radax, Gerhard Weidler, Hans-Jürgen Busse, Helga Stan-Lotter.   

Abstract

Two rod-shaped haloarchaeal strains, A1 and A2, were isolated from a bore core from a salt mine in Austria. The deposition of the salt is thought to have occurred during the Permian period (225-280 million years ago). The 16S rDNA sequences of the strains were 97.1% similar to that of the type species of the genus Halobacterium, which was also determined in this work. Polar lipids consisted of C20-C20 derivatives of phosphatidylglycerol, methylated phosphatidylglycerol phosphate, phosphatidylglycerol sulfate, triglycosyl diether and sulfated tetraglycosyl diether. Optimal salinity for growth was 15-17.5% NaCl; Mg++ was tolerated up to a concentration of 1 M. The DNA-DNA reassociation value of strain A1T was 25% with H. salinarum DSM 3754T and 41% with Halobacterium sp. NRC-1, respectively. Based on these results and other properties, e.g. whole cell protein patterns, menaquinone content and restriction patterns of DNA, strains A1 and A2 are members of a single species, for which we propose the name H. noricense. The type strain is A1 (DSM 15987T, ATCC BAA-852T, NCIMB 13967T). Since we present evidence that Halobacterium sp. NRC-1 is a member of H. salinarum, an emended description of H. salinarum is provided.

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Year:  2004        PMID: 15290323     DOI: 10.1007/s00792-004-0403-6

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  22 in total

Review 1.  Origins of halophilic microorganisms in ancient salt deposits.

Authors:  T J McGenity; R T Gemmell; W D Grant; H Stan-Lotter
Journal:  Environ Microbiol       Date:  2000-06       Impact factor: 5.491

2.  An improved technique for staining red halophilic bacteria.

Authors:  H P DUSSAULT
Journal:  J Bacteriol       Date:  1955-10       Impact factor: 3.490

3.  Archaea in coastal marine environments.

Authors:  E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

4.  Halorhabdus utahensis gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea from Great Salt Lake, Utah.

Authors:  M Wainø; B J Tindall; K Ingvorsen
Journal:  Int J Syst Evol Microbiol       Date:  2000-01       Impact factor: 2.747

5.  Very similar strains of Halococcus salifodinae are found in geographically separated permo-triassic salt deposits.

Authors:  Helga Stan-Lotter; Terry J McGenity; Andrea Legat; Ewald B M Denner; Kurt Glaser; Karl O Stetter; Gerhard Wanner
Journal:  Microbiology       Date:  1999-12       Impact factor: 2.777

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  API ZYM: a simple rapid system for the detection of bacterial enzymes.

Authors:  M W Humble; A King; I Phillips
Journal:  J Clin Pathol       Date:  1977-03       Impact factor: 3.411

8.  The primary structure of a procaryotic glycoprotein. Cloning and sequencing of the cell surface glycoprotein gene of halobacteria.

Authors:  J Lechner; M Sumper
Journal:  J Biol Chem       Date:  1987-07-15       Impact factor: 5.157

9.  Recovery of 16S ribosomal RNA gene fragments from ancient halite.

Authors:  Steven A Fish; Thomas J Shepherd; Terry J McGenity; William D Grant
Journal:  Nature       Date:  2002-05-23       Impact factor: 49.962

10.  Proposal of a new halobacterial genus Natrinema gen. nov., with two species Natrinema pellirubrum nom. nov. and Natrinema pallidum nom. nov.

Authors:  T J McGenity; R T Gemmell; W D Grant
Journal:  Int J Syst Bacteriol       Date:  1998-10
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  29 in total

1.  Halorubrum chaoviator sp. nov., a haloarchaeon isolated from sea salt in Baja California, Mexico, Western Australia and Naxos, Greece.

Authors:  Rocco L Mancinelli; Ragnhild Landheim; Cristina Sánchez-Porro; Marion Dornmayr-Pfaffenhuemer; Claudia Gruber; Andrea Legat; Antonio Ventosa; Christian Radax; Kunio Ihara; Melisa R White; Helga Stan-Lotter
Journal:  Int J Syst Evol Microbiol       Date:  2009-06-30       Impact factor: 2.747

2.  Responses of haloarchaea to simulated microgravity.

Authors:  Marion Dornmayr-Pfaffenhuemer; Andrea Legat; Karin Schwimbersky; Sergiu Fendrihan; Helga Stan-Lotter
Journal:  Astrobiology       Date:  2011-03-18       Impact factor: 4.335

3.  Phylogenetic diversity of bacterial and archaeal communities inhabiting the saline Lake Red located in Sovata, Romania.

Authors:  Andrea K Borsodi; Tamás Felföldi; István Máthé; Vivien Bognár; Mónika Knáb; Gergely Krett; Laura Jurecska; Erika M Tóth; Károly Márialigeti
Journal:  Extremophiles       Date:  2012-11-07       Impact factor: 2.395

4.  Extremely halophilic archaea and the issue of long-term microbial survival.

Authors:  Sergiu Fendrihan; Andrea Legat; Marion Pfaffenhuemer; Claudia Gruber; Gerhard Weidler; Friedrich Gerbl; Helga Stan-Lotter
Journal:  Rev Environ Sci Biotechnol       Date:  2006-08       Impact factor: 8.044

5.  Raman spectroscopy as a potentialmethod for the detection of extremely halophilic archaea embedded in halite in terrestrial and possibly extraterrestrial samples.

Authors:  Sergiu Fendrihan; Maurizio Musso; Helga Stan-Lotter
Journal:  J Raman Spectrosc       Date:  2009-12       Impact factor: 3.133

6.  Halobacterium salinarum storage and rehydration after spray drying and optimization of the processes for preservation of carotenoids.

Authors:  Sergei V Kalenov; Mariia G Gordienko; Ekaterina D Murzina; Daniil Y Poberezhniy; Dmitry V Baurin; Natalia E Suzina; Alexander N Morozov; Liubov M Yakubovich; Alexey A Belov; Victor I Panfilov; Oksana V Yarovaya; Michail M Il'in; Vladimir V Sorokin; Dmitry A Skladnev
Journal:  Extremophiles       Date:  2018-02-17       Impact factor: 2.395

7.  Physiological responses of the halophilic archaeon Halobacterium sp. strain NRC1 to desiccation and gamma irradiation.

Authors:  Molly Kottemann; Adrienne Kish; Chika Iloanusi; Sarah Bjork; Jocelyne DiRuggiero
Journal:  Extremophiles       Date:  2005-04-21       Impact factor: 2.395

8.  Haloferax chudinovii sp. nov., a halophilic archaeon from Permian potassium salt deposits.

Authors:  Alexander I Saralov; Roman V Baslerov; Boris B Kuznetsov
Journal:  Extremophiles       Date:  2013-03-23       Impact factor: 2.395

9.  Investigating the effects of simulated martian ultraviolet radiation on Halococcus dombrowskii and other extremely halophilic archaebacteria.

Authors:  Sergiu Fendrihan; Attila Bérces; Helmut Lammer; Maurizio Musso; György Rontó; Tatjana K Polacsek; Anita Holzinger; Christoph Kolb; Helga Stan-Lotter
Journal:  Astrobiology       Date:  2009 Jan-Feb       Impact factor: 4.335

10.  Identification of polyhydroxyalkanoates in Halococcus and other haloarchaeal species.

Authors:  Andrea Legat; Claudia Gruber; Klaus Zangger; Gerhard Wanner; Helga Stan-Lotter
Journal:  Appl Microbiol Biotechnol       Date:  2010-05-02       Impact factor: 4.813

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