Literature DB >> 15283917

Photo-CIDNP NMR methods for studying protein folding.

Ken Hun Mok1, Peter J Hore.   

Abstract

Chemically induced dynamic nuclear polarization (CIDNP) is a nuclear magnetic resonance phenomenon that can be used to probe the solvent-accessibility of tryptophan, tyrosine, and histidine residues in proteins by means of laser-induced photochemical reactions, resulting in significant enhancement of NMR signals. CIDNP offers good sensitivity as a surface probe of protein structure and is particularly powerful in time-resolved NMR measurements. Real-time, rapid-injection protein refolding experiments permit the observation of changes in the accessibility of specific residues during the folding process. CIDNP pulse-labeling gives information on the accessibility of residues in partially structured proteins (e.g., molten globule states) whose NMR spectra are broad and poorly resolved. Heteronuclear two-dimensional (15)N-(1)H CIDNP techniques allow identification of surface-accessible residues with improved resolution and sensitivity. These methods offer residue-specific structural and kinetic information on transient folding intermediates and other partially folded states of proteins that are not readily available from more routine NMR techniques.

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Year:  2004        PMID: 15283917     DOI: 10.1016/j.ymeth.2004.03.006

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  19 in total

1.  Heterologous expression of hen egg white lysozyme and resonance assignment of tryptophan side chains in its non-native states.

Authors:  Christian Schlörb; Katrin Ackermann; Christian Richter; Julia Wirmer; Harald Schwalbe
Journal:  J Biomol NMR       Date:  2005-10       Impact factor: 2.835

2.  Multiple subsets of side-chain packing in partially folded states of alpha-lactalbumins.

Authors:  K Hun Mok; Toshio Nagashima; Iain J Day; P J Hore; Christopher M Dobson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-13       Impact factor: 11.205

3.  Role of exchange and dipolar interactions in the radical pair model of the avian magnetic compass.

Authors:  Olga Efimova; P J Hore
Journal:  Biophys J       Date:  2007-11-02       Impact factor: 4.033

4.  A pre-existing hydrophobic collapse in the unfolded state of an ultrafast folding protein.

Authors:  K Hun Mok; Lars T Kuhn; Martin Goez; Iain J Day; Jasper C Lin; Niels H Andersen; P J Hore
Journal:  Nature       Date:  2007-04-11       Impact factor: 49.962

5.  Refolding of ribonuclease A monitored by real-time photo-CIDNP NMR spectroscopy.

Authors:  Iain J Day; Kiminori Maeda; Howard J Paisley; K Hun Mok; P J Hore
Journal:  J Biomol NMR       Date:  2009-05-13       Impact factor: 2.835

Review 6.  Magnetic field effects in flavoproteins and related systems.

Authors:  Emrys W Evans; Charlotte A Dodson; Kiminori Maeda; Till Biskup; C J Wedge; Christiane R Timmel
Journal:  Interface Focus       Date:  2013-10-06       Impact factor: 3.906

7.  Molecular basis of photochromism of a fluorescent protein revealed by direct 13C detection under laser illumination.

Authors:  Hideaki Mizuno; Tapas Kumar Mal; Markus Wälchli; Takashi Fukano; Mitsuhiko Ikura; Atsushi Miyawaki
Journal:  J Biomol NMR       Date:  2010-10-30       Impact factor: 2.835

8.  EPIC- and CHANCE-HSQC: two 15N-photo-CIDNP-enhanced pulse sequences for the sensitive detection of solvent-exposed tryptophan.

Authors:  Ashok Sekhar; Silvia Cavagnero
Journal:  J Magn Reson       Date:  2009-07-04       Impact factor: 2.229

9.  Chemical amplification of magnetic field effects relevant to avian magnetoreception.

Authors:  Daniel R Kattnig; Emrys W Evans; Victoire Déjean; Charlotte A Dodson; Mark I Wallace; Stuart R Mackenzie; Christiane R Timmel; P J Hore
Journal:  Nat Chem       Date:  2016-02-01       Impact factor: 24.427

10.  1H photo-CIDNP enhancements in heteronuclear correlation NMR spectroscopy.

Authors:  Ashok Sekhar; Silvia Cavagnero
Journal:  J Phys Chem B       Date:  2009-06-18       Impact factor: 2.991

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