Literature DB >> 15280227

Defects arising from whole-genome duplications in Saccharomyces cerevisiae.

Alex A Andalis1, Zuzana Storchova, Cora Styles, Timothy Galitski, David Pellman, Gerald R Fink.   

Abstract

Comparisons among closely related species have led to the proposal that the duplications found in many extant genomes are the remnants of an ancient polyploidization event, rather than a result of successive duplications of individual chromosomal segments. If this interpretation is correct, it would support Ohno's proposal that polyploidization drives evolution by generating the genetic material necessary for the creation of new genes. Paradoxically, analysis of contemporary polyploids suggests that increased ploidy is an inherently unstable state. To shed light on this apparent contradiction and to determine the effects of nascent duplications of the entire genome, we generated isogenic polyploid strains of the budding yeast Saccharomyces cerevisiae. Our data show that an increase in ploidy results in a marked decrease in a cell's ability to survive during stationary phase in growth medium. Tetraploid cells die rapidly, whereas isogenic haploids remain viable for weeks. Unlike haploid cells, which arrest growth as unbudded cells, tetraploid cells continue to bud and form mitotic spindles in stationary phase. The stationary-phase death of tetraploids can be prevented by mutations or conditions that result in growth arrest. These data show that whole-genome duplications are accompanied by defects that affect viability and subsequent survival of the new organism.

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Year:  2004        PMID: 15280227      PMCID: PMC1470947          DOI: 10.1534/genetics.104.029256

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  25 in total

1.  Behavior of spindles and spindle plaques in the cell cycle and conjugation of Saccharomyces cerevisiae.

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Journal:  J Bacteriol       Date:  1975-10       Impact factor: 3.490

2.  Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat.

Authors:  H Shaked; K Kashkush; H Ozkan; M Feldman; A A Levy
Journal:  Plant Cell       Date:  2001-08       Impact factor: 11.277

3.  Improved method for high efficiency transformation of intact yeast cells.

Authors:  D Gietz; A St Jean; R A Woods; R H Schiestl
Journal:  Nucleic Acids Res       Date:  1992-03-25       Impact factor: 16.971

4.  Evolution from fish to mammals by gene duplication.

Authors:  S Ohno; U Wolf; N B Atkin
Journal:  Hereditas       Date:  1968       Impact factor: 3.271

5.  The glucanase-soluble mannoproteins limit cell wall porosity in Saccharomyces cerevisiae.

Authors:  J G de Nobel; F M Klis; J Priem; T Munnik; H van den Ende
Journal:  Yeast       Date:  1990 Nov-Dec       Impact factor: 3.239

6.  Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae.

Authors:  Manolis Kellis; Bruce W Birren; Eric S Lander
Journal:  Nature       Date:  2004-03-07       Impact factor: 49.962

7.  Yeast mutant affected for viability upon nutrient starvation: characterization and cloning of the RVS161 gene.

Authors:  M Crouzet; M Urdaci; L Dulau; M Aigle
Journal:  Yeast       Date:  1991-10       Impact factor: 3.239

8.  Genetics and physiology of proline utilization in Saccharomyces cerevisiae: mutation causing constitutive enzyme expression.

Authors:  M C Brandriss; B Magasanik
Journal:  J Bacteriol       Date:  1979-11       Impact factor: 3.490

9.  Polyploids require Bik1 for kinetochore-microtubule attachment.

Authors:  H Lin; P de Carvalho; D Kho; C Y Tai; P Pierre; G R Fink; D Pellman
Journal:  J Cell Biol       Date:  2001-12-24       Impact factor: 10.539

10.  Comparison of the Saccharomyces cerevisiae G1 cyclins: Cln3 may be an upstream activator of Cln1, Cln2 and other cyclins.

Authors:  M Tyers; G Tokiwa; B Futcher
Journal:  EMBO J       Date:  1993-05       Impact factor: 11.598

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  35 in total

1.  Meiotic chromosome segregation in triploid strains of Saccharomyces cerevisiae.

Authors:  Jordan St Charles; Monica L Hamilton; Thomas D Petes
Journal:  Genetics       Date:  2010-08-09       Impact factor: 4.562

2.  Conserved functions of yeast genes support the duplication, degeneration and complementation model for gene duplication.

Authors:  Ambro van Hoof
Journal:  Genetics       Date:  2005-06-18       Impact factor: 4.562

3.  Effects of ploidy and mating type on virulence of Candida albicans.

Authors:  Ashraf S Ibrahim; B B Magee; D C Sheppard; Molly Yang; Sarah Kauffman; Jeff Becker; John E Edwards; P T Magee
Journal:  Infect Immun       Date:  2005-11       Impact factor: 3.441

Review 4.  Polyploidy in the Arabidopsis genus.

Authors:  Kirsten Bomblies; Andreas Madlung
Journal:  Chromosome Res       Date:  2014-06       Impact factor: 5.239

Review 5.  Ploidy Variation in Fungi: Polyploidy, Aneuploidy, and Genome Evolution.

Authors:  Robert T Todd; Anja Forche; Anna Selmecki
Journal:  Microbiol Spectr       Date:  2017-07

6.  The relationship among gene expression, the evolution of gene dosage, and the rate of protein evolution.

Authors:  Jean-François Gout; Daniel Kahn; Laurent Duret
Journal:  PLoS Genet       Date:  2010-05-13       Impact factor: 5.917

7.  Cryptococcal cell morphology affects host cell interactions and pathogenicity.

Authors:  Laura H Okagaki; Anna K Strain; Judith N Nielsen; Caroline Charlier; Nicholas J Baltes; Fabrice Chrétien; Joseph Heitman; Françoise Dromer; Kirsten Nielsen
Journal:  PLoS Pathog       Date:  2010-06-17       Impact factor: 6.823

8.  Control of transcription by cell size.

Authors:  Chia-Yung Wu; P Alexander Rolfe; David K Gifford; Gerald R Fink
Journal:  PLoS Biol       Date:  2010-11-02       Impact factor: 8.029

9.  The INO80 chromatin remodeling complex prevents polyploidy and maintains normal chromatin structure at centromeres.

Authors:  Anna L Chambers; Georgina Ormerod; Samuel C Durley; Tina L Sing; Grant W Brown; Nicholas A Kent; Jessica A Downs
Journal:  Genes Dev       Date:  2012-12-01       Impact factor: 11.361

10.  The RNA-binding protein Whi3 is a key regulator of developmental signaling and ploidy in Saccharomyces cerevisiae.

Authors:  Sarah Schladebeck; Hans-Ulrich Mösch
Journal:  Genetics       Date:  2013-06-14       Impact factor: 4.562

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