Literature DB >> 15278289

Cloning, functional expression and characterization of three Phanerochaete chrysosporium endo-1,4-beta-xylanases.

Barbara Decelle1, Adrian Tsang, Reginald K Storms.   

Abstract

Three Phanerochaete chrysosporium endo-1,4-beta-xylanase genes were cloned and expressed in Aspergillus niger. Two of these genes, xynA and xynC, encode family 10 glycoside hydrolases, while the third, xynB, codes for a family 11 glycoside hydrolase. All three xylanases possess a type I carbohydrate-binding domain connected to the catalytic domain by a linker region. The three xylanases were purified to homogeneity by weak anion or Avicell column chromatography and subsequently characterized. The XynA, XynB and XynC enzymes have molecular masses of 52, 30 and 50 kDa, respectively. Optimal activity was obtained at pH 4.5 and 70 degrees C with the family 10 xylanases and pH 4.5 and 60 degrees C with the family 11 xylanase. The measured Km when using birchwood xylan as the substrate was 3.71 +/- 0.69 mg/ml for XynA and XynC and was 9.96 +/- 1.45 mg/ml for XynB. Substrate specificity studies and the products released during the degradation of birchwood xylan suggest differences in catalytic properties between the two family 10 xylanases and the family 11 xylanase. Copyright 2004 Springer-Verlag

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Year:  2004        PMID: 15278289     DOI: 10.1007/s00294-004-0520-x

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  47 in total

1.  The Protein Data Bank.

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Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Three-dimensional structures of three engineered cellulose-binding domains of cellobiohydrolase I from Trichoderma reesei.

Authors:  M L Mattinen; M Kontteli; J Kerovuo; M Linder; A Annila; G Lindeberg; T Reinikainen; T Drakenberg
Journal:  Protein Sci       Date:  1997-02       Impact factor: 6.725

3.  Family-10 and family-11 xylanases differ in their capacity to enhance the bleachability of hardwood and softwood paper pulps.

Authors:  J H Clarke; J E Rixon; A Ciruela; H J Gilbert; G P Hazlewood
Journal:  Appl Microbiol Biotechnol       Date:  1997-08       Impact factor: 4.813

4.  Three-dimensional structure of Endo-1,4-beta-xylanase I from Aspergillus niger: molecular basis for its low pH optimum.

Authors:  U Krengel; B W Dijkstra
Journal:  J Mol Biol       Date:  1996-10-18       Impact factor: 5.469

5.  New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.

Authors:  B Henrissat; A Bairoch
Journal:  Biochem J       Date:  1993-08-01       Impact factor: 3.857

6.  Cellulose-binding domains promote hydrolysis of different sites on crystalline cellulose.

Authors:  G Carrard; A Koivula; H Söderlund; P Béguin
Journal:  Proc Natl Acad Sci U S A       Date:  2000-09-12       Impact factor: 11.205

7.  Endo-beta-1,4-xylanase families: differences in catalytic properties.

Authors:  P Biely; M Vrsanská; M Tenkanen; D Kluepfel
Journal:  J Biotechnol       Date:  1997-09-16       Impact factor: 3.307

8.  Molecular cloning of the genes for xylan degradation of Bacillus pumilus and their expression in Escherichia coli.

Authors:  W Panbangred; T Kondo; S Negoro; A Shinmyo; H Okada
Journal:  Mol Gen Genet       Date:  1983

9.  Purification and properties of thermostable beta-xylosidase from immature stalks of Saccharum officinarum L. (sugar cane).

Authors:  I Chinen; K Oouchi; H Tamaki; N Fukuda
Journal:  J Biochem       Date:  1982-12       Impact factor: 3.387

10.  Maize tapetum xylanase is synthesized as a precursor, processed and activated by a serine protease, and deposited on the pollen.

Authors:  Sherry S H Wu; Der Fen Suen; Han Chang Chang; Anthony H C Huang
Journal:  J Biol Chem       Date:  2002-10-03       Impact factor: 5.157

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  14 in total

1.  Podospora anserina hemicellulases potentiate the Trichoderma reesei secretome for saccharification of lignocellulosic biomass.

Authors:  Marie Couturier; Mireille Haon; Pedro M Coutinho; Bernard Henrissat; Laurence Lesage-Meessen; Jean-Guy Berrin
Journal:  Appl Environ Microbiol       Date:  2010-10-29       Impact factor: 4.792

2.  Transcriptome and secretome analyses of Phanerochaete chrysosporium reveal complex patterns of gene expression.

Authors:  Amber Vanden Wymelenberg; Jill Gaskell; Mike Mozuch; Phil Kersten; Grzegorz Sabat; Diego Martinez; Dan Cullen
Journal:  Appl Environ Microbiol       Date:  2009-04-17       Impact factor: 4.792

Review 3.  Thermophilic Degradation of Hemicellulose, a Critical Feedstock in the Production of Bioenergy and Other Value-Added Products.

Authors:  Isaac Cann; Gabriel V Pereira; Ahmed M Abdel-Hamid; Heejin Kim; Daniel Wefers; Boniface B Kayang; Tamotsu Kanai; Takaaki Sato; Rafael C Bernardi; Haruyuki Atomi; Roderick I Mackie
Journal:  Appl Environ Microbiol       Date:  2020-03-18       Impact factor: 4.792

Review 4.  Plant-polysaccharide-degrading enzymes from Basidiomycetes.

Authors:  Johanna Rytioja; Kristiina Hildén; Jennifer Yuzon; Annele Hatakka; Ronald P de Vries; Miia R Mäkelä
Journal:  Microbiol Mol Biol Rev       Date:  2014-12       Impact factor: 11.056

5.  Proteomic and functional analysis of the cellulase system expressed by Postia placenta during brown rot of solid wood.

Authors:  Jae San Ryu; Semarjit Shary; Carl J Houtman; Ellen A Panisko; Premsagar Korripally; Franz J St John; Casey Crooks; Matti Siika-Aho; Jon K Magnuson; Kenneth E Hammel
Journal:  Appl Environ Microbiol       Date:  2011-09-23       Impact factor: 4.792

6.  Significant alteration of gene expression in wood decay fungi Postia placenta and Phanerochaete chrysosporium by plant species.

Authors:  Amber Vanden Wymelenberg; Jill Gaskell; Michael Mozuch; Sandra Splinter BonDurant; Grzegorz Sabat; John Ralph; Oleksandr Skyba; Shawn D Mansfield; Robert A Blanchette; Igor V Grigoriev; Philip J Kersten; Dan Cullen
Journal:  Appl Environ Microbiol       Date:  2011-05-06       Impact factor: 4.792

7.  A thermophilic and acid stable family-10 xylanase from the acidophilic fungus Bispora sp. MEY-1.

Authors:  Huiying Luo; Jiang Li; Jun Yang; Hui Wang; Yuhui Yang; Huoqing Huang; Pengjun Shi; Tiezheng Yuan; Yunliu Fan; Bin Yao
Journal:  Extremophiles       Date:  2009-08-05       Impact factor: 2.395

8.  Comparative characterization of deletion derivatives of the modular xylanase XynA of Thermotoga maritima.

Authors:  Jörg Kleine; Wolfgang Liebl
Journal:  Extremophiles       Date:  2006-03-21       Impact factor: 2.395

9.  Heterologous Expression of Endo-1,4-beta-xylanaseA from Phanerochaete chrysosporium in Pichia pastoris.

Authors:  Nguyen Duc Huy; Saravanakumar Thiyagarajan; Yu-Lim Son; Seung-Moon Park
Journal:  Mycobiology       Date:  2011-06-16       Impact factor: 1.858

10.  Functional diversity and properties of multiple xylanases from Penicillium oxalicum GZ-2.

Authors:  Hanpeng Liao; Haiping Zheng; Shuixian Li; Zhong Wei; Xinlan Mei; Hongyu Ma; Qirong Shen; Yangchun Xu
Journal:  Sci Rep       Date:  2015-07-30       Impact factor: 4.379

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