Literature DB >> 15273935

Genomewide linkage scan for myopia susceptibility loci among Ashkenazi Jewish families shows evidence of linkage on chromosome 22q12.

Dwight Stambolian1, Grace Ibay, Lauren Reider, Debra Dana, Chris Moy, Melissa Schlifka, Taura Holmes, Elise Ciner, Joan E Bailey-Wilson.   

Abstract

Mild/moderate (common) myopia is a very common disorder, with both genetic and environmental influences. The environmental factors are related to near work and can be measured. There are no known genetic loci for common myopia. Our goal is to find evidence for a myopia susceptibility gene causing common myopia. Cycloplegic and manifest refraction were performed on 44 large American families of Ashkenazi Jewish descent, each with at least two affected siblings. Individuals with at least -1.00 diopter or lower in each meridian of both eyes were classified as myopic. Microsatellite genotyping with 387 markers was performed by the Center for Inherited Disease Research. Linkage analyses were conducted with parametric and nonparametric methods by use of 12 different penetrance models. The family-based association test was used for an association scan. A maximum multipoint parametric heterogeneity LOD (HLOD) score of 3.54 was observed at marker D22S685, and nonparametric linkage analyses gave consistent results, with a P value of.0002 at this marker. The parametric multipoint HLOD scores exceeded 3.0 for a 4-cM interval, and significant evidence of genetic heterogeneity was observed. This genomewide scan is the first step toward identifying a gene on chromosome 22 with an influence on common myopia. At present, we are following up our linkage results on chromosome 22 with a dense map of >1,500 single-nucleotide-polymorphism markers for fine mapping and association analyses. Identification of a susceptibility locus in this region may eventually lead to a better understanding of gene-environment interactions in the causation of this complex trait.

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Year:  2004        PMID: 15273935      PMCID: PMC1182023          DOI: 10.1086/423789

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  69 in total

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Journal:  Acta Ophthalmol (Copenh)       Date:  1994-08

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Journal:  Am J Hum Genet       Date:  2002-07-23       Impact factor: 11.025

9.  Genetic linkage and association between chromosome 1q and working memory function in schizophrenia.

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  63 in total

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2.  Association of matrix metalloproteinase gene polymorphisms with refractive error in Amish and Ashkenazi families.

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5.  Genomewide scan in Ashkenazi Jewish families demonstrates evidence of linkage of ocular refraction to a QTL on chromosome 1p36.

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Journal:  Hum Genet       Date:  2006-02-24       Impact factor: 4.132

Review 6.  INVOLVEMENT OF MULTIPLE MOLECULAR PATHWAYS IN THE GENETICS OF OCULAR REFRACTION AND MYOPIA.

Authors:  Robert Wojciechowski; Ching-Yu Cheng
Journal:  Retina       Date:  2018-01       Impact factor: 4.256

7.  Heritability and shared environment estimates for myopia and associated ocular biometric traits: the Genes in Myopia (GEM) family study.

Authors:  Christine Yi-Chin Chen; Katrina Jacqueline Scurrah; Jim Stankovich; Pam Garoufalis; Mohamed Dirani; Kelly Kathleen Pertile; Andrea Jane Richardson; Paul Mitchell; Paul Nigel Baird
Journal:  Hum Genet       Date:  2007-01-05       Impact factor: 4.132

8.  Mapping of susceptibility and protective loci for acute GVHD in unrelated HLA-matched bone marrow transplantation donors and recipients using 155 microsatellite markers on chromosome 22.

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Journal:  Immunogenetics       Date:  2007-01-03       Impact factor: 2.846

9.  The retinoic acid receptor alpha (RARA) gene is not associated with myopia, hypermetropia, and ocular biometric measures.

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10.  AC and AG dinucleotide repeats in the PAX6 P1 promoter are associated with high myopia.

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Journal:  Mol Vis       Date:  2009-11-05       Impact factor: 2.367

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