Literature DB >> 15273312

The C-terminal domain of dimeric serine hydroxymethyltransferase plays a key role in stabilization of the quaternary structure and cooperative unfolding of protein: domain swapping studies with enzymes having high sequence identity.

Anant Narayan Bhatt1, M Yahiya Khan, Vinod Bhakuni.   

Abstract

The serine hydroxymethyltransferase from Bacillus subtilis (bsSHMT) and B. stearothermophilus (bstSHMT) are both homodimers and share approximately 77% sequence identity; however, they show very different thermal stabilities and unfolding pathways. For investigating the role of N- and C-terminal domains in stability and unfolding of dimeric SHMTs, we have swapped the structural domains between bs- and bstSHMT and generated the two novel chimeric proteins bsbstc and bstbsc, respectively. The chimeras had secondary structure, tyrosine, and pyridoxal-5'-phosphate microenvironment similar to that of the wild-type proteins. The chimeras showed enzymatic activity slightly higher than that of the wild-type proteins. Interestingly, the guanidium chloride (GdmCl)-induced unfolding showed that unlike the wild-type bsSHMT, which undergoes dissociation of native dimer into monomers at low guanidium chloride (GdmCl) concentration, resulting in a non-cooperative unfolding of enzyme, its chimera bsbstc, having the C-terminal domain of bstSHMT was resistant to low GdmCl concentration and showed a GdmCl-induced cooperative unfolding from native dimer to unfolded monomer. In contrast, the wild-type dimeric bstSHMT was resistant to low GdmCl concentration and showed a GdmCl-induced cooperative unfolding, whereas its chimera bstbsc, having the C- terminal domain of bsSHMT, showed dissociation of native dimer into monomer at low GdmCl concentration and a GdmCl-induced non-cooperative unfolding. These results clearly demonstrate that the C-terminal domain of dimeric SHMT plays a vital role in stabilization of the oligomeric structure of the native enzyme hence modulating its unfolding pathway.

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Year:  2004        PMID: 15273312      PMCID: PMC2279811          DOI: 10.1110/ps.04769004

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  20 in total

1.  Reversible unfolding of sheep liver tetrameric serine hydroxymethyltransferase.

Authors:  B Venkatesha; J B Udgaonkar; N A Rao; H S Savithri
Journal:  Biochim Biophys Acta       Date:  1998-04-23

2.  Interactions contributing to the tyrosyl circular dichroism bands of ribonuclease S and A.

Authors:  E H Strickland
Journal:  Biochemistry       Date:  1972-08-29       Impact factor: 3.162

3.  Serine hydroxymethyltransferase. Effect of proteases on the activity and structure of the cytosolic enzyme.

Authors:  V Schirch; D Schirch; F Martini; F Bossa
Journal:  Eur J Biochem       Date:  1986-11-17

4.  Mitochondrial aspartate aminotransferase 27/32-410. Partially active enzyme derivative produced by limited proteolytic cleavage of native enzyme.

Authors:  E Sandmeier; P Christen
Journal:  J Biol Chem       Date:  1980-11-10       Impact factor: 5.157

5.  Importance of the amino terminus in maintenance of oligomeric structure of sheep liver cytosolic serine hydroxymethyltransferase.

Authors:  J R Jagath; B Sharma; B Bhaskar; A Datta; N A Rao; H S Savithri
Journal:  Eur J Biochem       Date:  1997-07-01

6.  Structural studies on folding intermediates of serine hydroxymethyltransferase using fluorescence resonance energy transfer.

Authors:  K Cai; V Schirch
Journal:  J Biol Chem       Date:  1996-11-01       Impact factor: 5.157

7.  The affinity of pyridoxal 5'-phosphate for folding intermediates of Escherichia coli serine hydroxymethyltransferase.

Authors:  K Cai; D Schirch; V Schirch
Journal:  J Biol Chem       Date:  1995-08-18       Impact factor: 5.157

8.  Catalytic and structural properties of trypsin-treated 4-aminobutyrate aminotransferase.

Authors:  D S Kim; J E Churchich
Journal:  J Biol Chem       Date:  1983-10-10       Impact factor: 5.157

9.  In vivo analysis of folate coenzymes and their compartmentation in Saccharomyces cerevisiae.

Authors:  J B McNeil; A L Bognar; R E Pearlman
Journal:  Genetics       Date:  1996-02       Impact factor: 4.562

Review 10.  Folylpolyglutamate synthesis and role in the regulation of one-carbon metabolism.

Authors:  B Shane
Journal:  Vitam Horm       Date:  1989       Impact factor: 3.421

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  7 in total

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Journal:  Biophys J       Date:  2016-06-07       Impact factor: 4.033

2.  Folding pathway of the pyridoxal 5'-phosphate C-S lyase MalY from Escherichia coli.

Authors:  Mariarita Bertoldi; Barbara Cellini; Douglas V Laurents; Carla Borri Voltattorni
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3.  Modular organization of FDH: Exploring the basis of hydrolase catalysis.

Authors:  Steven N Reuland; Alexander P Vlasov; Sergey A Krupenko
Journal:  Protein Sci       Date:  2006-04-05       Impact factor: 6.725

4.  Entamoeba histolytica Phosphoserine aminotransferase (EhPSAT): insights into the structure-function relationship.

Authors:  Vibhor Mishra; Vahab Ali; Tomoyoshi Nozaki; Vinod Bhakuni
Journal:  BMC Res Notes       Date:  2010-03-03

5.  Determinants of Thermostability in Serine Hydroxymethyltransferase Identified by Principal Component Analysis.

Authors:  Fei Leng; Lu-Yun Wu; Chang Lu; Xian-Ming Pan
Journal:  Sci Rep       Date:  2017-04-19       Impact factor: 4.379

6.  Structural and functional insight into serine hydroxymethyltransferase from Helicobacter pylori.

Authors:  Andreea Sodolescu; Cyril Dian; Laurent Terradot; Latifa Bouzhir-Sima; Roxane Lestini; Hannu Myllykallio; Stéphane Skouloubris; Ursula Liebl
Journal:  PLoS One       Date:  2018-12-14       Impact factor: 3.240

7.  Essential Function of the Serine Hydroxymethyl Transferase (SHMT) Gene During Rapid Syncytial Cell Cycles in Drosophila.

Authors:  Franziska Winkler; Maria Kriebel; Michaela Clever; Stephanie Gröning; Jörg Großhans
Journal:  G3 (Bethesda)       Date:  2017-07-05       Impact factor: 3.154

  7 in total

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