Literature DB >> 15272086

A YY1-binding site is required for accurate human LINE-1 transcription initiation.

Jyoti N Athanikar1, Richard M Badge, John V Moran.   

Abstract

The initial step in Long Interspersed Element-1 (LINE-1) retrotransposition requires transcription from an internal promoter located within its 5'-untranslated region (5'-UTR). Previous studies have identified a YY1 (Yin Yang 1)-binding site as an important sequence in LINE-1 transcription. Here, we demonstrate that mutations in the YY1-binding site have only minor effects on transcription activation of the full-length 5'-UTR and LINE-1 mobility in a single round cultured cell retrotransposition assay. Instead, these mutations disrupt proper initiation of transcription from the +1 site of the 5'-UTR. Thus, we propose that the YY1-binding site functions as a component of the LINE-1 core promoter to direct accurate transcription initiation. Indeed, this sequence may explain the evolutionary success of LINE-1 by enabling full-length retrotransposed copies to undergo autonomous retrotransposition in subsequent generations.

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Year:  2004        PMID: 15272086      PMCID: PMC506791          DOI: 10.1093/nar/gkh698

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  52 in total

1.  Members of the SRY family regulate the human LINE retrotransposons.

Authors:  T Tchénio; J F Casella; T Heidmann
Journal:  Nucleic Acids Res       Date:  2000-01-15       Impact factor: 16.971

2.  A transient assay reveals that cultured human cells can accommodate multiple LINE-1 retrotransposition events.

Authors:  W Wei; T A Morrish; R S Alisch; J V Moran
Journal:  Anal Biochem       Date:  2000-09-10       Impact factor: 3.365

3.  Human L1 retrotransposition: cis preference versus trans complementation.

Authors:  W Wei; N Gilbert; S L Ooi; J F Lawler; E M Ostertag; H H Kazazian; J D Boeke; J V Moran
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

Review 4.  Common themes in assembly and function of eukaryotic transcription complexes.

Authors:  L Zawel; D Reinberg
Journal:  Annu Rev Biochem       Date:  1995       Impact factor: 23.643

5.  Targeted disruption of mouse Yin Yang 1 transcription factor results in peri-implantation lethality.

Authors:  M E Donohoe; X Zhang; L McGinnis; J Biggers; E Li; Y Shi
Journal:  Mol Cell Biol       Date:  1999-10       Impact factor: 4.272

Review 6.  The biological properties and evolutionary dynamics of mammalian LINE-1 retrotransposons.

Authors:  A V Furano
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2000

7.  Transcriptional repression by YY1 is mediated by interaction with a mammalian homolog of the yeast global regulator RPD3.

Authors:  W M Yang; C Inouye; Y Zeng; D Bearss; E Seto
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-12       Impact factor: 11.205

8.  RNA polymerase III dependence of the human L1 promoter and possible participation of the RNA polymerase II factor YY1 in the RNA polymerase III transcription system.

Authors:  K Kurose; K Hata; M Hattori; Y Sakaki
Journal:  Nucleic Acids Res       Date:  1995-09-25       Impact factor: 16.971

9.  The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila.

Authors:  T W Burke; J T Kadonaga
Journal:  Genes Dev       Date:  1997-11-15       Impact factor: 11.361

10.  Cytoplasmic ribonucleoprotein complexes containing human LINE-1 protein and RNA.

Authors:  H Hohjoh; M F Singer
Journal:  EMBO J       Date:  1996-02-01       Impact factor: 11.598

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  86 in total

1.  Similarities between long interspersed element-1 (LINE-1) reverse transcriptase and telomerase.

Authors:  Huira C Kopera; John B Moldovan; Tammy A Morrish; Jose Luis Garcia-Perez; John V Moran
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-22       Impact factor: 11.205

2.  Epigenetic control of retrotransposon expression in human embryonic stem cells.

Authors:  Angela Macia; Martin Muñoz-Lopez; Jose Luis Cortes; Robert K Hastings; Santiago Morell; Gema Lucena-Aguilar; Juan Antonio Marchal; Richard M Badge; Jose Luis Garcia-Perez
Journal:  Mol Cell Biol       Date:  2010-11-01       Impact factor: 4.272

3.  Drawing a fine line on endogenous retroelement activity.

Authors:  Nathaly Castro-Diaz; Marc Friedli; Didier Trono
Journal:  Mob Genet Elements       Date:  2015-02-03

4.  Molecular evolution and tempo of amplification of human LINE-1 retrotransposons since the origin of primates.

Authors:  Hameed Khan; Arian Smit; Stéphane Boissinot
Journal:  Genome Res       Date:  2005-12-12       Impact factor: 9.043

5.  Analysis of 5' junctions of human LINE-1 and Alu retrotransposons suggests an alternative model for 5'-end attachment requiring microhomology-mediated end-joining.

Authors:  Nora Zingler; Ute Willhoeft; Hans-Peter Brose; Volker Schoder; Thomas Jahns; Kay-Martin O Hanschmann; Tammy A Morrish; Johannes Löwer; Gerald G Schumann
Journal:  Genome Res       Date:  2005-06       Impact factor: 9.043

6.  Multiple fates of L1 retrotransposition intermediates in cultured human cells.

Authors:  Nicolas Gilbert; Sheila Lutz; Tammy A Morrish; John V Moran
Journal:  Mol Cell Biol       Date:  2005-09       Impact factor: 4.272

7.  Repetitive sequence environment distinguishes housekeeping genes.

Authors:  C Daniel Eller; Moira Regelson; Barry Merriman; Stan Nelson; Steve Horvath; York Marahrens
Journal:  Gene       Date:  2006-10-05       Impact factor: 3.688

8.  Analysis of overrepresented motifs in human core promoters reveals dual regulatory roles of YY1.

Authors:  Hualin Xi; Yong Yu; Yutao Fu; Jonathan Foley; Anason Halees; Zhiping Weng
Journal:  Genome Res       Date:  2007-06       Impact factor: 9.043

9.  Efficient translation initiation directed by the 900-nucleotide-long and GC-rich 5' untranslated region of the human retrotransposon LINE-1 mRNA is strictly cap dependent rather than internal ribosome entry site mediated.

Authors:  Sergey E Dmitriev; Dmitri E Andreev; Ilya M Terenin; Ivan A Olovnikov; Vladimir S Prassolov; William C Merrick; Ivan N Shatsky
Journal:  Mol Cell Biol       Date:  2007-04-30       Impact factor: 4.272

10.  Poly(A) binding protein C1 is essential for efficient L1 retrotransposition and affects L1 RNP formation.

Authors:  Lixin Dai; Martin S Taylor; Kathryn A O'Donnell; Jef D Boeke
Journal:  Mol Cell Biol       Date:  2012-08-20       Impact factor: 4.272

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