Literature DB >> 15268251

Activation barriers and rate constants for hydration of platinum and palladium square-planar complexes: an ab initio study.

Jaroslav V Burda1, Michal Zeizinger, Jerzy Leszczynski.   

Abstract

In the present work, an ab initio study on hydration (a metal-ligand replacement by water molecule or OH- group) of cis- and transplatin and their palladium analogs was performed within a neutral pseudomolecule approach (e.g., metal-complex+water as reactant complex). Subsequent replacement of the second ligand was considered. Optimizations were performed at the MP2/6-31+G(d) level with single-point energy evaluation using the CCSD(T)/6-31++G(d,p) approach. For the obtained structures of reactants, transition states (TS's), and products, both thermodynamic (reaction energies and Gibbs energies) and kinetic (rate constants) characteristics were estimated. It was found that all the hydration processes are mildly endothermic reactions-in the first step they require 8.7 and 10.2 kcal/mol for ammonium and chloride replacement in cisplatin and 13.8 and 17.8 kcal/mol in the transplatin case, respectively. Corresponding energies for cispalladium amount to 5.2 and 9.8 kcal/mol, and 11.0 and 17.7 kcal/mol for transpalladium. Based on vibrational analyses at MP2/6-31+G(d) level, transition state theory rate constants were computed for all the hydration reactions. A qualitative agreement between the predicted and known experimental data was achieved. It was also found that the close similarities in reaction thermodynamics of both Pd(II) and Pt(II) complexes (average difference for all the hydration reactions are approximately 1.8 kcal/mol) do not correspond to the TS characteristics. The TS energies for examined Pd(II) complexes are about 9.7 kcal/mol lower in comparison with the Pt analogs. This leads to 10(6) times faster reaction course in the Pd cases. This is by 1 or 2 orders of magnitude more than the results based on experimental measurements.

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Year:  2004        PMID: 15268251     DOI: 10.1063/1.1633757

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  6 in total

1.  Pt-bridges in various single-strand and double-helix DNA sequences. DFT and MP2 study of the cisplatin coordination with guanine, adenine, and cytosine.

Authors:  Matej Pavelka; Jaroslav V Burda
Journal:  J Mol Model       Date:  2006-09-20       Impact factor: 1.810

2.  Exploration of various electronic properties along the reaction coordinate for hydration of Pt(II) and Ru(II) complexes; the CCSD, MPx, and DFT computational study.

Authors:  Jaroslav V Burda; Zdeněk Futera; Zdeněk Chval
Journal:  J Mol Model       Date:  2013-10-15       Impact factor: 1.810

3.  Non-empirical quantum chemical studies on electron transfer reactions in trans- and cis-diamminedichloroplatinum(II) complexes.

Authors:  Janina Kuduk-Jaworska; Henryk Chojnacki; Jerzy J Jański
Journal:  J Mol Model       Date:  2011-05-11       Impact factor: 1.810

4.  Formation of chelate structure between His-Met dipeptide and diaqua-cisplatin complex; DFT/PCM computational study.

Authors:  Michal Maixner; Helio F Dos Santos; Jaroslav V Burda
Journal:  J Biol Inorg Chem       Date:  2018-02-08       Impact factor: 3.358

5.  Activation of the cisplatin and transplatin complexes in solution with constant pH and concentration of chloride anions; quantum chemical study.

Authors:  Tomáš Zimmermann; Jerzy Leszczynski; Jaroslav V Burda
Journal:  J Mol Model       Date:  2011-04-27       Impact factor: 1.810

6.  Comparison of the electronic properties, and thermodynamic and kinetic parameters of the aquation of selected platinum(II) derivatives with their anticancer IC50 indexes.

Authors:  Ondrej Bradác; Tomás Zimmermann; Jaroslav V Burda
Journal:  J Mol Model       Date:  2008-03-06       Impact factor: 1.810

  6 in total

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