Literature DB >> 15267582

The importance of three-body terms in the fragment molecular orbital method.

Dmitri G Fedorov1, Kazuo Kitaura.   

Abstract

A previously proposed two-body fragment molecular orbital method based on the restricted Hartree-Fock (RHF) method was extended to include explicit three-body terms. The accuracy of the method was tested on a set of representative molecules: (H(2)O)(n), n=16, 32, and 64, as well as alpha and beta n-mers of alanine, n=10, 20, and 40, using STO-3G, 3-21G, 6-31G, and 6-31++G(**) basis sets. Two- and three-body results are presented separately for assigning one and two molecules (or residues) per fragment. Total energies are found to differ from the regular RHF method by at most DeltaE(2/1)=0.06, DeltaE(2/2)=0.04, DeltaE(3/1)=0.02, and DeltaE(3/2)=0.003 (a.u.); rms energy gradients differ by at most DeltaG(2/1)=0.0015, DeltaG(2/2)=0.000 75, DeltaG(3/1)=0.000 20, and DeltaG(3/2)=0.000 10 (a.u./bohr), and rms dipole moments are reproduced with at most deltaD(2/1)=3.7, deltaD(2/2)=3.4, deltaD(3/1)=2.6, and deltaD(3/2)=3.1 (%) relative error, where the subscript notation n/m refers to the n-body method based on m molecules (residues) per fragment. A few of the largest three-body calculations were performed with a separated trimer approximation, which presumably somewhat lowered the accuracy of mostly dipole moments which are very sensitive to slight variations in the density distribution. The proposed method is capable of providing sufficient chemical accuracy while providing detailed information on many-body interactions. (c) 2004 American Institute of Physics.

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Year:  2004        PMID: 15267582     DOI: 10.1063/1.1687334

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  22 in total

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5.  An Efficient Method to Evaluate Intermolecular Interaction Energies in Large Systems Using Overlapping Multicenter ONIOM and the Fragment Molecular Orbital Method.

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9.  Analysis of the Errors in the Electrostatically Embedded Many-Body Expansion of the Energy and the Correlation Energy for Zn and Cd Coordination Complexes with Five and Six Ligands and Use of the Analysis to Develop a Generally Successful Fragmentation Strategy.

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Journal:  J Phys Chem Lett       Date:  2018-06-04       Impact factor: 6.475

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