Literature DB >> 15267560

Temperature dependence of the hydrophobic hydration and interaction of simple solutes: an examination of five popular water models.

Dietmar Paschek1.   

Abstract

We examine five different popular rigid water models (SPC, SPCE, TIP3P, TIP4P, and TIP5P) using molecular dynamics simulations in order to investigate the hydrophobic hydration and interaction of apolar Lennard-Jones solutes as a function of temperature in the range between 275 and 375 K along the 0.1 MPa isobar. For all investigated models and state points we calculate the excess chemical potential for the noble gases and methane employing the Widom particle insertion technique. All water models exhibit too small hydration entropies, but show a clear hierarchy. TIP3P shows poorest agreement with experiment, whereas TIP5P is closest to the experimental data at lower temperatures and SPCE is closest at higher temperatures. As a first approximation, this behavior can be rationalized as a temperature shift with respect to the solvation behavior found in real water. A rescaling procedure inspired by the information theory model of Hummer et al. [Chem. Phys. 258, 349 (2000)] suggests that the different solubility curves for the different models and real water can be largely explained on the basis of the different density curves at constant pressure. In addition, the models that give a good representation of the water structure at ambient conditions (TIP5P, SPCE, and TIP4P) show considerably better agreement with the experimental data than the ones which exhibit less structured O-O correlation functions (SPC and TIP3P). In the second part of the paper we calculate the hydrophobic interaction between xenon particles directly from a series of 60 ns simulation runs. We find that the temperature dependence of the association is to a large extent related to the strength of the solvation entropy. Nevertheless, differences between the models seem to require a more detailed molecular picture. The TIP5P model shows by far the strongest temperature dependence. The suggested density rescaling is also applied to the chemical potential in the xenon-xenon contact-pair configuration, indicating the presence of a temperature where the hydrophobic interaction turns into purely repulsive. The predicted association for xenon in real water suggests the presence of a strong variation with temperature, comparable to the behavior found for TIP5P water. Comparing different water models and experimental data we conclude that a proper description of density effects is an important requirement for a water model to account correctly for the correct description of the hydrophobic effects. A water model exhibiting a density maximum at the correct temperature is desirable. (c) 2004 American Institute of Physics

Entities:  

Year:  2004        PMID: 15267560     DOI: 10.1063/1.1652015

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  23 in total

1.  Potential energy functions for atomic-level simulations of water and organic and biomolecular systems.

Authors:  William L Jorgensen; Julian Tirado-Rives
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-03       Impact factor: 11.205

2.  Hydrophobic association of alpha-helices, steric dewetting, and enthalpic barriers to protein folding.

Authors:  Justin L MacCallum; Maria Sabaye Moghaddam; Hue Sun Chan; D Peter Tieleman
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-02       Impact factor: 11.205

3.  Static and dynamic correlations in water at hydrophobic interfaces.

Authors:  Jeetain Mittal; Gerhard Hummer
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-11       Impact factor: 11.205

4.  Hydrophobe-water interactions: methane as a model.

Authors:  F Despa; R S Berry
Journal:  Biophys J       Date:  2008-08-01       Impact factor: 4.033

5.  Molecular-scale hydrophobic interactions between hard-sphere reference solutes are attractive and endothermic.

Authors:  Mangesh I Chaudhari; Sinead A Holleran; Henry S Ashbaugh; Lawrence R Pratt
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-02       Impact factor: 11.205

6.  Towards temperature-dependent coarse-grained potentials of side-chain interactions for protein folding simulations. I: molecular dynamics study of a pair of methane molecules in water at various temperatures.

Authors:  Emil Sobolewski; Mariusz Makowski; Stanislaw Oldziej; Cezary Czaplewski; Adam Liwo; Harold A Scheraga
Journal:  Protein Eng Des Sel       Date:  2009-06-25       Impact factor: 1.650

7.  Toward temperature-dependent coarse-grained potentials of side-chain interactions for protein folding simulations. II. Molecular dynamics study of pairs of different types of interactions in water at various temperatures.

Authors:  Emil Sobolewski; Stanisław Ołdziej; Marta Wiśniewska; Adam Liwo; Mariusz Makowski
Journal:  J Phys Chem B       Date:  2012-04-16       Impact factor: 2.991

8.  The application of the integral equation theory to study the hydrophobic interaction.

Authors:  Tomaž Mohorič; Tomaz Urbic; Barbara Hribar-Lee
Journal:  J Chem Phys       Date:  2014-01-14       Impact factor: 3.488

9.  Water structuring above solutes with planar hydrophobic surfaces.

Authors:  Udo Schnupf; John W Brady
Journal:  Phys Chem Chem Phys       Date:  2017-05-17       Impact factor: 3.676

10.  Water in cavity-ligand recognition.

Authors:  Riccardo Baron; Piotr Setny; J Andrew McCammon
Journal:  J Am Chem Soc       Date:  2010-09-01       Impact factor: 15.419

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