Literature DB >> 15257298

RNAi knockdown of hPrp31 leads to an accumulation of U4/U6 di-snRNPs in Cajal bodies.

Nina Schaffert1, Markus Hossbach, Rainer Heintzmann, Tilmann Achsel, Reinhard Lührmann.   

Abstract

Cajal bodies (CBs) are subnuclear organelles of animal and plant cells. A role of CBs in the assembly and maturation of small nuclear ribonucleoproteins (snRNP) has been proposed but is poorly understood. Here we have addressed the question where U4/U6.U5 tri-snRNP assembly occurs in the nucleus. The U4/U6.U5 tri-snRNP is a central unit of the spliceosome and must be re-formed from its components after each round of splicing. By combining RNAi and biochemical methods, we demonstrate that, after knockdown of the U4/U6-specific hPrp31 (61 K) or the U5-specific hPrp6 (102 K) protein in HeLa cells, tri-snRNP formation is inhibited and stable U5 mono-snRNPs and U4/U6 di-snRNPs containing U4/U6 proteins and the U4/U6 recycling factor p110 accumulate. Thus, hPrp31 and hPrp6 form an essential connection between the U4/U6 and U5 snRNPs in vivo. Using fluorescence microscopy, we show that, in the absence of either hPrp31 or hPrp6, U4/U6 di-snRNPs as well as p110 accumulate in Cajal bodies. In contrast, U5 snRNPs largely remain in nucleoplasmic speckles. Our data support the idea that CBs may play a role in tri-snRNP recycling.

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Year:  2004        PMID: 15257298      PMCID: PMC514917          DOI: 10.1038/sj.emboj.7600296

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  46 in total

1.  Functional interaction of a novel 15.5kD [U4/U6.U5] tri-snRNP protein with the 5' stem-loop of U4 snRNA.

Authors:  S Nottrott; K Hartmuth; P Fabrizio; H Urlaub; I Vidovic; R Ficner; R Lührmann
Journal:  EMBO J       Date:  1999-11-01       Impact factor: 11.598

2.  Newly assembled snRNPs associate with coiled bodies before speckles, suggesting a nuclear snRNP maturation pathway.

Authors:  J E Sleeman; A I Lamond
Journal:  Curr Biol       Date:  1999-10-07       Impact factor: 10.834

3.  A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site.

Authors:  C L Will; C Schneider; A M MacMillan; N F Katopodis; G Neubauer; M Wilm; R Lührmann; C C Query
Journal:  EMBO J       Date:  2001-08-15       Impact factor: 11.598

4.  The 65 and 110 kDa SR-related proteins of the U4/U6.U5 tri-snRNP are essential for the assembly of mature spliceosomes.

Authors:  O V Makarova; E M Makarov; R Lührmann
Journal:  EMBO J       Date:  2001-05-15       Impact factor: 11.598

Review 5.  Spliceosomal UsnRNP biogenesis, structure and function.

Authors:  C L Will; R Lührmann
Journal:  Curr Opin Cell Biol       Date:  2001-06       Impact factor: 8.382

Review 6.  The centennial of the Cajal body.

Authors:  Joseph G Gall
Journal:  Nat Rev Mol Cell Biol       Date:  2003-12       Impact factor: 94.444

7.  In vitro reconstitution of snRNPs: a reconstituted U4/U6 snRNP participates in splicing complex formation.

Authors:  C W Pikielny; A Bindereif; M R Green
Journal:  Genes Dev       Date:  1989-04       Impact factor: 11.361

8.  Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells.

Authors:  S M Elbashir; J Harborth; W Lendeckel; A Yalcin; K Weber; T Tuschl
Journal:  Nature       Date:  2001-05-24       Impact factor: 49.962

9.  The human homologue of the yeast splicing factor prp6p contains multiple TPR elements and is stably associated with the U5 snRNP via protein-protein interactions.

Authors:  E M Makarov; O V Makarova; T Achsel; R Lührmann
Journal:  J Mol Biol       Date:  2000-05-12       Impact factor: 5.469

10.  A human homolog of yeast pre-mRNA splicing gene, PRP31, underlies autosomal dominant retinitis pigmentosa on chromosome 19q13.4 (RP11).

Authors:  E N Vithana; L Abu-Safieh; M J Allen; A Carey; M Papaioannou; C Chakarova; M Al-Maghtheh; N D Ebenezer; C Willis; A T Moore; A C Bird; D M Hunt; S S Bhattacharya
Journal:  Mol Cell       Date:  2001-08       Impact factor: 17.970

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  71 in total

1.  A distant coilin homologue is required for the formation of cajal bodies in Arabidopsis.

Authors:  Sarah Collier; Alison Pendle; Kurt Boudonck; Tjeerd van Rij; Liam Dolan; Peter Shaw
Journal:  Mol Biol Cell       Date:  2006-04-19       Impact factor: 4.138

Review 2.  The Cajal body and histone locus body.

Authors:  Zehra Nizami; Svetlana Deryusheva; Joseph G Gall
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-05-26       Impact factor: 10.005

Review 3.  Pre-mRNA splicing and retinitis pigmentosa.

Authors:  Daniel Mordes; Xiaoyan Luo; Amar Kar; David Kuo; Lili Xu; Kazuo Fushimi; Guowu Yu; Paul Sternberg; Jane Y Wu
Journal:  Mol Vis       Date:  2006-10-26       Impact factor: 2.367

Review 4.  The Cajal body: a meeting place for spliceosomal snRNPs in the nuclear maze.

Authors:  David Stanek; Karla M Neugebauer
Journal:  Chromosoma       Date:  2006-03-31       Impact factor: 4.316

5.  The network of protein-protein interactions within the human U4/U6.U5 tri-snRNP.

Authors:  Sunbin Liu; Reinhard Rauhut; Hans-Peter Vornlocher; Reinhard Lührmann
Journal:  RNA       Date:  2006-05-24       Impact factor: 4.942

6.  Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies.

Authors:  Ira Lemm; Cyrille Girard; Andreas N Kuhn; Nicholas J Watkins; Marc Schneider; Rémy Bordonné; Reinhard Lührmann
Journal:  Mol Biol Cell       Date:  2006-05-10       Impact factor: 4.138

7.  Enhancement of U4/U6 small nuclear ribonucleoprotein particle association in Cajal bodies predicted by mathematical modeling.

Authors:  Mirko Klingauf; David Stanek; Karla M Neugebauer
Journal:  Mol Biol Cell       Date:  2006-09-20       Impact factor: 4.138

8.  Identification, cloning, and functional analysis of the human U6 snRNA-specific terminal uridylyl transferase.

Authors:  Ralf Trippe; Elena Guschina; Markus Hossbach; Henning Urlaub; Reinhard Lührmann; Bernd-Joachim Benecke
Journal:  RNA       Date:  2006-06-21       Impact factor: 4.942

9.  Sad1 counteracts Brr2-mediated dissociation of U4/U6.U5 in tri-snRNP homeostasis.

Authors:  Yu-Hsin Huang; Che-Sheng Chung; Der-I Kao; Tzu-Chung Kao; Soo-Chen Cheng
Journal:  Mol Cell Biol       Date:  2013-11-04       Impact factor: 4.272

10.  Spliceosomal small nuclear ribonucleoprotein particles repeatedly cycle through Cajal bodies.

Authors:  David Stanek; Jarmila Pridalová-Hnilicová; Ivan Novotný; Martina Huranová; Michaela Blazíková; Xin Wen; Aparna K Sapra; Karla M Neugebauer
Journal:  Mol Biol Cell       Date:  2008-03-26       Impact factor: 4.138

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