Literature DB >> 15245907

Codon bias and heterologous protein expression.

Claes Gustafsson1, Sridhar Govindarajan, Jeremy Minshull.   

Abstract

The expression of functional proteins in heterologous hosts is a cornerstone of modern biotechnology. Unfortunately, proteins are often difficult to express outside their original context. They might contain codons that are rarely used in the desired host, come from organisms that use non-canonical code or contain expression-limiting regulatory elements within their coding sequence. Improvements in the speed and cost of gene synthesis have facilitated the complete redesign of entire gene sequences to maximize the likelihood of high protein expression. Redesign strategies are discussed here, including modification of translation initiation regions, alteration of mRNA structural elements and use of different codon biases.

Mesh:

Substances:

Year:  2004        PMID: 15245907     DOI: 10.1016/j.tibtech.2004.04.006

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  378 in total

1.  Improvement of multiple-stress tolerance and lactic acid production in Lactococcus lactis NZ9000 under conditions of thermal stress by heterologous expression of Escherichia coli DnaK.

Authors:  Shinya Sugimoto; Chihana Higashi; Shunsuke Matsumoto; Kenji Sonomoto
Journal:  Appl Environ Microbiol       Date:  2010-05-07       Impact factor: 4.792

2.  Cloning and expression of a CYP720B orthologue involved in the biosynthesis of diterpene resin acids in Pinus brutia.

Authors:  Asli Semiz; Alaattin Sen
Journal:  Mol Biol Rep       Date:  2014-11-14       Impact factor: 2.316

Review 3.  From miracle fruit to transgenic tomato: mass production of the taste-modifying protein miraculin in transgenic plants.

Authors:  Kyoko Hiwasa-Tanase; Tadayoshi Hirai; Kazuhisa Kato; Narendra Duhita; Hiroshi Ezura
Journal:  Plant Cell Rep       Date:  2011-12-08       Impact factor: 4.570

4.  C.U.R.R.F. (Codon Usage regarding Restriction Finder): a free Java(®)-based tool to detect potential restriction sites in both coding and non-coding DNA sequences.

Authors:  Michael Gatter; Thomas Gatter; Falk Matthäus
Journal:  Mol Biotechnol       Date:  2012-10       Impact factor: 2.695

5.  Haematococcus as a promising cell factory to produce recombinant pharmaceutical proteins.

Authors:  Amir Ata Saei; Parisa Ghanbari; Abolfazl Barzegari
Journal:  Mol Biol Rep       Date:  2012-06-26       Impact factor: 2.316

6.  Overlapping codes within protein-coding sequences.

Authors:  Shalev Itzkovitz; Eran Hodis; Eran Segal
Journal:  Genome Res       Date:  2010-09-14       Impact factor: 9.043

7.  Functional characterization of a phospholipase A(2) homolog from Rickettsia typhi.

Authors:  M Sayeedur Rahman; Nicole C Ammerman; Khandra T Sears; Shane M Ceraul; Abdu F Azad
Journal:  J Bacteriol       Date:  2010-04-30       Impact factor: 3.490

8.  Fully codon-optimized luciferase uncovers novel temperature characteristics of the Neurospora clock.

Authors:  Van D Gooch; Arun Mehra; Luis F Larrondo; Julie Fox; Melissa Touroutoutoudis; Jennifer J Loros; Jay C Dunlap
Journal:  Eukaryot Cell       Date:  2007-08-31

9.  Codon optimality is a major determinant of mRNA stability.

Authors:  Vladimir Presnyak; Najwa Alhusaini; Ying-Hsin Chen; Sophie Martin; Nathan Morris; Nicholas Kline; Sara Olson; David Weinberg; Kristian E Baker; Brenton R Graveley; Jeff Coller
Journal:  Cell       Date:  2015-03-12       Impact factor: 41.582

10.  Codon usage regulates human KRAS expression at both transcriptional and translational levels.

Authors:  Jingjing Fu; Yunkun Dang; Christopher Counter; Yi Liu
Journal:  J Biol Chem       Date:  2018-10-01       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.