Literature DB >> 15243788

The activation of the [NiFe]-hydrogenase from Allochromatium vinosum. An infrared spectro-electrochemical study.

Boris Bleijlevens1, Fleur A van Broekhuizen, Antonio L De Lacey, Winfried Roseboom, Victor M Fernandez, Simon P J Albracht.   

Abstract

The membrane-bound [NiFe]-hydrogenase from Allochromatium vinosum can occur in several inactive or active states. This study presents the first systematic infrared characterisation of the A. vinosum enzyme, with emphasis on the spectro-electrochemical properties of the inactive/active transition. This transition involves an energy barrier, which can be overcome at elevated temperatures. The reduced Ready enzyme can exist in two different inactive states, which are in an apparent acid-base equilibrium. It is proposed that a hydroxyl ligand in a bridging position in the Ni-Fe site is protonated and that the formed water molecule is subsequently removed. This enables the active site to bind hydrogen in a bridging position, allowing the formation of the fully active state of the enzyme. It is further shown that the active site in enzyme reduced by 1 bar H(2) can occur in three different electron paramagnetic resonance (EPR)-silent states with a different degree of protonation.

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Year:  2004        PMID: 15243788     DOI: 10.1007/s00775-004-0570-z

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  40 in total

1.  The H2 sensor of Ralstonia eutropha. Biochemical characteristics, spectroscopic properties, and its interaction with a histidine protein kinase.

Authors:  M Bernhard; T Buhrke; B Bleijlevens; A L De Lacey; V M Fernandez; S P Albracht; B Friedrich
Journal:  J Biol Chem       Date:  2001-02-16       Impact factor: 5.157

2.  Density functional calculations for modeling the active site of nickel-iron hydrogenases. 2. Predictions for the unready and ready States and the corresponding activation processes.

Authors:  Christian Stadler; Antonio L de Lacey; Yael Montet; Anne Volbeda; Juan C Fontecilla-Camps; Jose C Conesa; Víctor M Fernández
Journal:  Inorg Chem       Date:  2002-08-26       Impact factor: 5.165

3.  Enzyme electrokinetics: hydrogen evolution and oxidation by Allochromatium vinosum [NiFe]-hydrogenase.

Authors:  Christophe Léger; Anne K Jones; Winfried Roseboom; Simon P J Albracht; Fraser A Armstrong
Journal:  Biochemistry       Date:  2002-12-31       Impact factor: 3.162

4.  Redox-linked conformational changes in proteins detected by a combination of infrared spectroscopy and protein electrochemistry. Evaluation of the technique with cytochrome c.

Authors:  D Moss; E Nabedryk; J Breton; W Mäntele
Journal:  Eur J Biochem       Date:  1990-02-14

5.  Electron-spin-resonance/electron-paramagnetic-resonance spectroscopy of iron-sulphur enzymes.

Authors:  R Cammack; D S Patil; V M Fernandez
Journal:  Biochem Soc Trans       Date:  1985-06       Impact factor: 5.407

6.  The [NiFe] hydrogenase from Allochromatium vinosum studied in EPR-detectable states: H/D exchange experiments that yield new information about the structure of the active site.

Authors:  B Bleijlevens; B W Faber; S P Albracht
Journal:  J Biol Inorg Chem       Date:  2001-10       Impact factor: 3.358

7.  Effect of 17O2 and 13CO on EPR spectra of nickel in hydrogenase from Chromatium vinosum.

Authors:  J W van der Zwaan; J M Coremans; E C Bouwens; S P Albracht
Journal:  Biochim Biophys Acta       Date:  1990-11-15

8.  Enzyme electrokinetics: electrochemical studies of the anaerobic interconversions between active and inactive states of Allochromatium vinosum [NiFe]-hydrogenase.

Authors:  Anne K Jones; Sophie E Lamle; Harsh R Pershad; Kylie A Vincent; Simon P J Albracht; Fraser A Armstrong
Journal:  J Am Chem Soc       Date:  2003-07-16       Impact factor: 15.419

9.  Further characterization of the spin coupling observed in oxidized hydrogenase from Chromatium vinosum. A Mössbauer and multifrequency EPR study.

Authors:  K K Surerus; M Chen; J W van der Zwaan; F M Rusnak; M Kolk; E C Duin; S P Albracht; E Münck
Journal:  Biochemistry       Date:  1994-04-26       Impact factor: 3.162

10.  Reactions of H2, CO, and O2 with active [NiFe]-hydrogenase from Allochromatium vinosum. A stopped-flow infrared study.

Authors:  Simon J George; Sergei Kurkin; Roger N F Thorneley; Simon P J Albracht
Journal:  Biochemistry       Date:  2004-06-01       Impact factor: 3.162

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  25 in total

1.  A threonine stabilizes the NiC and NiR catalytic intermediates of [NiFe]-hydrogenase.

Authors:  Abbas Abou-Hamdan; Pierre Ceccaldi; Hugo Lebrette; Oscar Gutiérrez-Sanz; Pierre Richaud; Laurent Cournac; Bruno Guigliarelli; Antonio L De Lacey; Christophe Léger; Anne Volbeda; Bénédicte Burlat; Sébastien Dementin
Journal:  J Biol Chem       Date:  2015-02-09       Impact factor: 5.157

2.  The active site of the [FeFe]-hydrogenase from Desulfovibrio desulfuricans. II. Redox properties, light sensitivity and CO-ligand exchange as observed by infrared spectroscopy.

Authors:  Winfried Roseboom; Antonio L De Lacey; Victor M Fernandez; E Claude Hatchikian; Simon P J Albracht
Journal:  J Biol Inorg Chem       Date:  2005-12-02       Impact factor: 3.358

3.  Purification, crystallization and preliminary X-ray analysis of the membrane-bound [NiFe] hydrogenase from Allochromatium vinosum.

Authors:  Petra Kellers; Hideaki Ogata; Wolfgang Lubitz
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-07-05

4.  An improved purification procedure for the soluble [NiFe]-hydrogenase of Ralstonia eutropha: new insights into its (in)stability and spectroscopic properties.

Authors:  Eddy van der Linden; Tanja Burgdorf; Antonio L de Lacey; Thorsten Buhrke; Marcel Scholte; Victor M Fernandez; Bärbel Friedrich; Simon P J Albracht
Journal:  J Biol Inorg Chem       Date:  2006-01-18       Impact factor: 3.358

5.  Diiron Dithiolate Hydrides Complemented with Proton-Responsive Phosphine-Amine Ligands.

Authors:  Michaela R Carlson; Ryan Gilbert-Wilson; Danielle R Gray; Joyee Mitra; Thomas B Rauchfuss; Casseday P Richers
Journal:  Eur J Inorg Chem       Date:  2017-07-05       Impact factor: 2.524

6.  Crystallographic studies of [NiFe]-hydrogenase mutants: towards consensus structures for the elusive unready oxidized states.

Authors:  Anne Volbeda; Lydie Martin; Elodie Barbier; Oscar Gutiérrez-Sanz; Antonio L De Lacey; Pierre-Pol Liebgott; Sébastien Dementin; Marc Rousset; Juan C Fontecilla-Camps
Journal:  J Biol Inorg Chem       Date:  2014-10-15       Impact factor: 3.358

7.  O2-independent formation of the inactive states of NiFe hydrogenase.

Authors:  Abbas Abou Hamdan; Bénédicte Burlat; Oscar Gutiérrez-Sanz; Pierre-Pol Liebgott; Carole Baffert; Antonio L De Lacey; Marc Rousset; Bruno Guigliarelli; Christophe Léger; Sébastien Dementin
Journal:  Nat Chem Biol       Date:  2012-11-11       Impact factor: 15.040

8.  Structural differences between the ready and unready oxidized states of [NiFe] hydrogenases.

Authors:  Anne Volbeda; Lydie Martin; Christine Cavazza; Michaël Matho; Bart W Faber; Winfried Roseboom; Simon P J Albracht; Elsa Garcin; Marc Rousset; Juan C Fontecilla-Camps
Journal:  J Biol Inorg Chem       Date:  2005-04-01       Impact factor: 3.358

9.  Characterization of a HoxEFUYH type of [NiFe] hydrogenase from Allochromatium vinosum and some EPR and IR properties of the hydrogenase module.

Authors:  Minnan Long; Jingjing Liu; Zhifeng Chen; Boris Bleijlevens; Winfried Roseboom; Simon P J Albracht
Journal:  J Biol Inorg Chem       Date:  2006-09-13       Impact factor: 3.358

10.  Probing intermediates in the activation cycle of [NiFe] hydrogenase by infrared spectroscopy: the Ni-SIr state and its light sensitivity.

Authors:  Maria-Eirini Pandelia; Hideaki Ogata; Leslie J Currell; Marco Flores; Wolfgang Lubitz
Journal:  J Biol Inorg Chem       Date:  2009-07-21       Impact factor: 3.358

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