Literature DB >> 15240469

Quantification of Protein-Lipid Selectivity using FRET: Application to the M13 Major Coat Protein.

Fábio Fernandes1, Luís M S Loura, Rob Koehorst, Ruud B Spruijt, Marcus A Hemminga, Alexander Fedorov, Manuel Prieto.   

Abstract

Quantification of lipid selectivity by membrane proteins has been previously addressed mainly from electron spin resonance studies. We present here a new methodology for quantification of protein-lipid selectivity based on fluorescence resonance energy transfer. A mutant of M13 major coat protein was labeled with 7-diethylamino-3((4'iodoacetyl)amino)phenyl-4-methylcoumarin to be used as the donor in energy transfer studies. Phospholipids labeled with N-(7-nitro-2-1,3-benzoxadiazol-4-yl) were selected as the acceptors. The dependence of protein-lipid selectivity on both hydrophobic mismatch and headgroup family was determined. M13 major coat protein exhibited larger selectivity toward phospholipids which allow for a better hydrophobic matching. Increased selectivity was also observed for anionic phospholipids and the relative association constants agreed with the ones already presented in the literature and obtained through electron spin resonance studies. This result led us to conclude that fluorescence resonance energy transfer is a promising methodology in protein-lipid selectivity studies.

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Year:  2004        PMID: 15240469      PMCID: PMC1304355          DOI: 10.1529/biophysj.104.040337

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  34 in total

1.  Resonance energy transfer in a model system of membranes: application to gel and liquid crystalline phases.

Authors:  L M Loura; A Fedorov; M Prieto
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

Review 2.  Chemistry and biology of N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)-labeled lipids: fluorescent probes of biological and model membranes.

Authors:  A Chattopadhyay
Journal:  Chem Phys Lipids       Date:  1990-03       Impact factor: 3.329

3.  Physical state of bulk and protein-associated lipid in nicotinic acetylcholine receptor-rich membrane studied by laurdan generalized polarization and fluorescence energy transfer.

Authors:  S S Antollini; M A Soto; I Bonini de Romanelli; C Gutiérrez-Merino; P Sotomayor; F J Barrantes
Journal:  Biophys J       Date:  1996-03       Impact factor: 4.033

4.  Determination of the transbilayer distribution of fluorescent lipid analogues by nonradiative fluorescence resonance energy transfer.

Authors:  D E Wolf; A P Winiski; A E Ting; K M Bocian; R E Pagano
Journal:  Biochemistry       Date:  1992-03-24       Impact factor: 3.162

5.  Accessibility and environment probing using cysteine residues introduced along the putative transmembrane domain of the major coat protein of bacteriophage M13.

Authors:  R B Spruijt; C J Wolfs; J W Verver; M A Hemminga
Journal:  Biochemistry       Date:  1996-08-13       Impact factor: 3.162

6.  7-nitrobenz-2-oxa-1,3-diazole-4-yl-labeled phospholipids in lipid membranes: differences in fluorescence behavior.

Authors:  S Mazères; V Schram; J F Tocanne; A Lopez
Journal:  Biophys J       Date:  1996-07       Impact factor: 4.033

7.  A small protein in model membranes: a time-resolved fluorescence and ESR study on the interaction of M13 coat protein with lipid bilayers.

Authors:  J C Sanders; M F Ottaviani; A van Hoek; A J Visser; M A Hemminga
Journal:  Eur Biophys J       Date:  1992       Impact factor: 1.733

8.  Extension of the parallax analysis of membrane penetration depth to the polar region of model membranes: use of fluorescence quenching by a spin-label attached to the phospholipid polar headgroup.

Authors:  F S Abrams; E London
Journal:  Biochemistry       Date:  1993-10-12       Impact factor: 3.162

9.  Aggregation-related conformational change of the membrane-associated coat protein of bacteriophage M13.

Authors:  R B Spruijt; C J Wolfs; M A Hemminga
Journal:  Biochemistry       Date:  1989-11-14       Impact factor: 3.162

10.  Stoichiometry, selectivity, and exchange dynamics of lipid-protein interaction with bacteriophage M13 coat protein studied by spin label electron spin resonance. Effects of protein secondary structure.

Authors:  S J Peelen; J C Sanders; M A Hemminga; D Marsh
Journal:  Biochemistry       Date:  1992-03-17       Impact factor: 3.162

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  11 in total

1.  Transmembrane peptides influence the affinity of sterols for phospholipid bilayers.

Authors:  Joel H Nyström; Max Lönnfors; Thomas K M Nyholm
Journal:  Biophys J       Date:  2010-07-21       Impact factor: 4.033

2.  FRET study of membrane proteins: simulation-based fitting for analysis of membrane protein embedment and association.

Authors:  Petr V Nazarov; Rob B M Koehorst; Werner L Vos; Vladimir V Apanasovich; Marcus A Hemminga
Journal:  Biophys J       Date:  2006-04-21       Impact factor: 4.033

3.  FRET study of membrane proteins: determination of the tilt and orientation of the N-terminal domain of M13 major coat protein.

Authors:  Petr V Nazarov; Rob B M Koehorst; Werner L Vos; Vladimir V Apanasovich; Marcus A Hemminga
Journal:  Biophys J       Date:  2006-11-17       Impact factor: 4.033

4.  Non-uniform membrane probe distribution in resonance energy transfer: application to protein-lipid selectivity.

Authors:  Ricardo C Capeta; José A Poveda; Luís M S Loura
Journal:  J Fluoresc       Date:  2006-03-11       Impact factor: 2.217

5.  Role of helix 0 of the N-BAR domain in membrane curvature generation.

Authors:  Fábio Fernandes; Luís M S Loura; Francisco J Chichón; Jose L Carrascosa; Alexander Fedorov; Manuel Prieto
Journal:  Biophys J       Date:  2008-01-16       Impact factor: 4.033

6.  Membrane protein frustration: protein incorporation into hydrophobic mismatched binary lipid mixtures.

Authors:  David Stopar; Ruud B Spruijt; Marcus A Hemminga
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

Review 7.  Quantification of protein-lipid selectivity using FRET.

Authors:  Luís M S Loura; Manuel Prieto; Fábio Fernandes
Journal:  Eur Biophys J       Date:  2010-03       Impact factor: 1.733

8.  Motional restrictions of membrane proteins: a site-directed spin labeling study.

Authors:  David Stopar; Janez Strancar; Ruud B Spruijt; Marcus A Hemminga
Journal:  Biophys J       Date:  2006-08-11       Impact factor: 4.033

Review 9.  Using hydrogen/deuterium exchange mass spectrometry to define the specific interactions of the phospholipase A2 superfamily with lipid substrates, inhibitors, and membranes.

Authors:  Jian Cao; John E Burke; Edward A Dennis
Journal:  J Biol Chem       Date:  2012-12-03       Impact factor: 5.157

10.  Lipid bilayer topology of the transmembrane alpha-helix of M13 Major coat protein and bilayer polarity profile by site-directed fluorescence spectroscopy.

Authors:  Rob B M Koehorst; Ruud B Spruijt; Frank J Vergeldt; Marcus A Hemminga
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

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