Literature DB >> 15240327

Online tool for analysis of denaturing gradient gel electrophoresis profiles.

Florian Huber1, Peter Peduzzi.   

Abstract

We present an online tool (EquiBands, http://www.univie.ac.at/IECB/limno/equibands/EquiBands.html) that quantifies the matching of two bands considered to be the same in different samples, even when samples are applied to different denaturing gradient gel electrophoresis gels. With an environmental example we demonstrate the procedure for the classification of two bands of different samples with the help of EquiBands.

Mesh：

Year:  2004        PMID： 15240327      PMCID： PMC444777          DOI： 10.1128/AEM.70.7.4390-4392.2004

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  2 in total

1.  Succession of bacterial community structure along the Changjiang River determined by denaturing gradient gel electrophoresis and clone library analysis.

Authors:  Hiroyuki Sekiguchi; Masataka Watanabe; Tadaatsu Nakahara; Baohua Xu; Hiroo Uchiyama
Journal:  Appl Environ Microbiol       Date:  2002-10       Impact factor: 4.792

2.  Changes in bacterial and eukaryotic community structure after mass lysis of filamentous cyanobacteria associated with viruses.

Authors:  E J van Hannen; G Zwart; M P van Agterveld; H J Gons; J Ebert; H J Laanbroek
Journal:  Appl Environ Microbiol       Date:  1999-02       Impact factor: 4.792
  2 in total
  1 in total

1.  A New Standard-Based Polynomial Interpolation (SBPIn) method to address gel-to-gel variability for the comparison of multiple denaturing gradient gel electrophoresis profile matrices.

Authors:  Alexis Valentín-Vargas; Jon Chorover; Raina M Maier
Journal:  J Microbiol Methods       Date:  2012-12-09       Impact factor: 2.363
  1 in total

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