Literature DB >> 15236591

Electrostatic control of the tryptophan radical in cytochrome c peroxidase.

Tiffany P Barrows1, B Bhaskar, Thomas L Poulos.   

Abstract

Previously a K(+)-binding site, analogous to that found in ascorbate peroxidase (APX), was engineered into cytochrome c peroxidase (CcP) to test the hypothesis that the bound K(+) influences the stability of the Trp191 cation radical formed during the CcP catalytic cycle (Bonagura et al., (1996) Biochemistry 35, 6107 and Bonagura et al., (1999) Biochemistry 38, 5528). Characterization of this mutant, designated CcPK2, showed that the stability of the Trp191 cation radical is dependent on the occupancy of the engineered K(+) site and that the Trp191 radical was much less stable in this mutant than in wild-type CcP. The mutations Met230Leu, Met231Gln, and Met172Ser have now been constructed on the CcPK2 mutant template to test if the Met residues also contribute to the stabilization of the Trp191 cation radical. Crystal structures show that the mutations affect only the local structure near the sites of mutation. Removal of these electronegative residues located less than 8 A from the Trp radical results in a further destabilization of the Trp radical. The characteristic EPR signal associated with the Trp radical is significantly narrowed and is characteristic of a tyrosine radical signal. Double-mixing stopped-flow experiments, where the delay time between the formation of CcP compound I and its mixing with horse heart ferrocytochrome c is varied, show that the stability of the Trp radical decreases as the Met residues are removed from the proximal cavity. When taken together, these results demonstrate a strong correlation between the experimentally determined stability of the Trp191 radical, the enzyme activity, and the calculated electrostatic stabilization of the Trp191 radical.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15236591     DOI: 10.1021/bi049531g

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  15 in total

Review 1.  Proton-coupled electron transfer.

Authors:  My Hang V Huynh; Thomas J Meyer
Journal:  Chem Rev       Date:  2007-11       Impact factor: 60.622

2.  Leishmania major peroxidase is a cytochrome c peroxidase.

Authors:  Victoria S Jasion; Thomas L Poulos
Journal:  Biochemistry       Date:  2012-03-14       Impact factor: 3.162

3.  Constraints on the Radical Cation Center of Cytochrome c Peroxidase for Electron Transfer from Cytochrome c.

Authors:  Thomas M Payne; Estella F Yee; Boris Dzikovski; Brian R Crane
Journal:  Biochemistry       Date:  2016-08-17       Impact factor: 3.162

4.  Crystal structure of Leishmania major peroxidase and characterization of the compound i tryptophan radical.

Authors:  Victoria S Jasion; Julio A Polanco; Yergalem T Meharenna; Huiying Li; Thomas L Poulos
Journal:  J Biol Chem       Date:  2011-05-12       Impact factor: 5.157

Review 5.  Heme enzyme structure and function.

Authors:  Thomas L Poulos
Journal:  Chem Rev       Date:  2014-01-08       Impact factor: 60.622

6.  Kinetic and crystallographic studies of a redesigned manganese-binding site in cytochrome c peroxidase.

Authors:  Thomas D Pfister; Amir Y Mirarefi; Alan J Gengenbach; Xuan Zhao; Connor Danstrom; Nicole Conatser; Yi-Gui Gao; Howard Robinson; Charles F Zukoski; Andrew H-J Wang; Yi Lu
Journal:  J Biol Inorg Chem       Date:  2006-10-05       Impact factor: 3.358

7.  Mapping hole hopping escape routes in proteins.

Authors:  Ruijie D Teo; Ruobing Wang; Elizabeth R Smithwick; Agostino Migliore; Michael J Therien; David N Beratan
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-24       Impact factor: 11.205

Review 8.  Thirty years of heme peroxidase structural biology.

Authors:  Thomas L Poulos
Journal:  Arch Biochem Biophys       Date:  2010-03-03       Impact factor: 4.013

9.  The stacking tryptophan of galactose oxidase: a second-coordination sphere residue that has profound effects on tyrosyl radical behavior and enzyme catalysis.

Authors:  Melanie S Rogers; Ejan M Tyler; Nana Akyumani; Christian R Kurtis; R Kate Spooner; Sarah E Deacon; Sarita Tamber; Susan J Firbank; Khaled Mahmoud; Peter F Knowles; Simon E V Phillips; Michael J McPherson; David M Dooley
Journal:  Biochemistry       Date:  2007-03-27       Impact factor: 3.162

10.  Peroxide-induced radical formation at TYR385 and TYR504 in human PGHS-1.

Authors:  Corina E Rogge; Wen Liu; Richard J Kulmacz; Ah-Lim Tsai
Journal:  J Inorg Biochem       Date:  2009-04-17       Impact factor: 4.155

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.