Literature DB >> 15236589

Probing the transition-state structure of dual-specificity protein phosphatases using a physiological substrate mimic.

Piotr K Grzyska1, Youngjoo Kim, Michael D Jackson, Alvan C Hengge, John M Denu.   

Abstract

Dual-specificity phosphatases (DSPs) belong to the large family of protein tyrosine phosphatases that contain the active-site motif (H/V)CxxGxxR(S/T), but unlike the tyrosine-specific enzymes, DSPs are able to catalyze the efficient hydrolysis of both phosphotyrosine and phosphoserine/threonine found on signaling proteins, as well as a variety of small-molecule aryl and alkyl phosphates. It is unclear how DSPs accomplish similar reaction rates for phosphoesters, whose reactivity (i.e., pK(a) of the leaving group) can vary by more than 10(8). Here, we utilize the alkyl phosphate m-nitrobenzyl phosphate (mNBP), leaving-group pK(a) = 14.9, as a physiological substrate mimic to probe the mechanism and transition state of the DSP, Vaccinia H1-related (VHR). Detailed pH and kinetic isotope effects of the V/K value for mNBP indicates that VHR reacts with the phosphate dianion of mNBP and that the nonbridge phosphate oxygen atoms are unprotonated in the transition state. (18)O and solvent isotope effects indicate differences in the respective timing of the proton transfer to the leaving group and P-O fission; with the alkyl ester substrate, protonation is ahead of P-O fission, while with the aryl substrate, the two processes are more synchronous. Kinetic analysis of the general-acid mutant D92N with mNBP was consistent with the requirement of Asp-92 in protonating the ester oxygen, either in a step prior to significant P-O bond cleavage or in a concerted but asynchronous mechanism in which protonation is ahead of P-O bond fission. Collectively, the data indicate that VHR and likely all DSPs can match leaving-group potential with the timing of the proton transfer to the ester oxygen, such that diverse aryl and alkyl phosphoesters are turned over with similar catalytic efficiency.

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Year:  2004        PMID: 15236589     DOI: 10.1021/bi049473z

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  4 in total

Review 1.  Kinetic isotope effects in the characterization of catalysis by protein tyrosine phosphatases.

Authors:  Alvan C Hengge
Journal:  Biochim Biophys Acta       Date:  2015-04-01

2.  Alkaline phosphatase mono- and diesterase reactions: comparative transition state analysis.

Authors:  Jesse G Zalatan; Daniel Herschlag
Journal:  J Am Chem Soc       Date:  2006-02-01       Impact factor: 15.419

3.  Redox regulation of the human dual specificity phosphatase YVH1 through disulfide bond formation.

Authors:  Christopher A Bonham; Panayiotis O Vacratsis
Journal:  J Biol Chem       Date:  2009-06-30       Impact factor: 5.157

4.  Allosteric Impact of the Variable Insert Loop in Vaccinia H1-Related (VHR) Phosphatase.

Authors:  Victor A Beaumont; Krystle Reiss; Zexing Qu; Brandon Allen; Victor S Batista; J Patrick Loria
Journal:  Biochemistry       Date:  2020-05-06       Impact factor: 3.162

  4 in total

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