Literature DB >> 15226420

U1A inhibits cleavage at the immunoglobulin M heavy-chain secretory poly(A) site by binding between the two downstream GU-rich regions.

Catherine Phillips1, Niseema Pachikara, Samuel I Gunderson.   

Abstract

The immunoglobulin M heavy-chain locus contains two poly(A) sites which are alternatively expressed during B-cell differentiation. Despite its promoter proximal location, the secretory poly(A) site is not expressed in undifferentiated cells. Crucial to the activation of the secretory poly(A) site during B-cell differentiation are changes in the binding of cleavage stimulatory factor 64K to GU-rich elements downstream of the poly(A) site. What regulates this change is not understood. The secretory poly(A) site contains two downstream GU-rich regions separated by a 29-nucleotide sequence. Both GU-rich regions are necessary for binding of the specific cleavage-polyadenylation complex. We demonstrate here that U1A binds two (AUGCN(1-3)C) motifs within the 29-nucleotide sequence and inhibits the binding of cleavage stimulatory factor 64K and cleavage at the secretory poly(A) site.

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Year:  2004        PMID: 15226420      PMCID: PMC434241          DOI: 10.1128/MCB.24.14.6162-6171.2004

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  31 in total

Review 1.  Alternative poly(A) site selection in complex transcription units: means to an end?

Authors:  G Edwalds-Gilbert; K L Veraldi; C Milcarek
Journal:  Nucleic Acids Res       Date:  1997-07-01       Impact factor: 16.971

2.  The polyadenylation factor CstF-64 regulates alternative processing of IgM heavy chain pre-mRNA during B cell differentiation.

Authors:  Y Takagaki; R L Seipelt; M L Peterson; J L Manley
Journal:  Cell       Date:  1996-11-29       Impact factor: 41.582

3.  Inducible nuclear factors binding the IgM heavy chain pre-mRNA secretory poly(A) site.

Authors:  C Phillips; A Schimpl; W Dietrich-Goetz; J B Clements; A Virtanen
Journal:  Eur J Immunol       Date:  1996-12       Impact factor: 5.532

4.  Involvement of the carboxyl terminus of vertebrate poly(A) polymerase in U1A autoregulation and in the coupling of splicing and polyadenylation.

Authors:  S I Gunderson; S Vagner; M Polycarpou-Schwarz; I W Mattaj
Journal:  Genes Dev       Date:  1997-03-15       Impact factor: 11.361

5.  A 6-fold difference in the half-life of immunoglobulin mu heavy chain mRNA in cell lines representing two stages of B cell differentiation.

Authors:  A Cox; J S Emtage
Journal:  Nucleic Acids Res       Date:  1989-12-25       Impact factor: 16.971

6.  The murine IgM secretory poly(A) site contains dual upstream and downstream elements which affect polyadenylation.

Authors:  C Phillips; A Virtanen
Journal:  Nucleic Acids Res       Date:  1997-06-15       Impact factor: 16.971

7.  RNA recognition by the human polyadenylation factor CstF.

Authors:  Y Takagaki; J L Manley
Journal:  Mol Cell Biol       Date:  1997-07       Impact factor: 4.272

8.  Regulation of poly(A) site use during mouse B-cell development involves a change in the binding of a general polyadenylation factor in a B-cell stage-specific manner.

Authors:  G Edwalds-Gilbert; C Milcarek
Journal:  Mol Cell Biol       Date:  1995-11       Impact factor: 4.272

9.  The 160-kD subunit of human cleavage-polyadenylation specificity factor coordinates pre-mRNA 3'-end formation.

Authors:  K G Murthy; J L Manley
Journal:  Genes Dev       Date:  1995-11-01       Impact factor: 11.361

10.  A complex secondary structure in U1A pre-mRNA that binds two molecules of U1A protein is required for regulation of polyadenylation.

Authors:  C W van Gelder; S I Gunderson; E J Jansen; W C Boelens; M Polycarpou-Schwarz; I W Mattaj; W J van Venrooij
Journal:  EMBO J       Date:  1993-12-15       Impact factor: 11.598

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  31 in total

1.  Multiple features contribute to the use of the immunoglobulin M secretion-specific poly(A) signal but are not required for developmental regulation.

Authors:  Martha L Peterson; Gina L Bingham; Clarissa Cowan
Journal:  Mol Cell Biol       Date:  2006-09       Impact factor: 4.272

2.  Non-snRNP U1A levels decrease during mammalian B-cell differentiation and release the IgM secretory poly(A) site from repression.

Authors:  Jianglin Ma; Samuel I Gunderson; Catherine Phillips
Journal:  RNA       Date:  2006-01       Impact factor: 4.942

3.  A bipartite U1 site represses U1A expression by synergizing with PIE to inhibit nuclear polyadenylation.

Authors:  Fei Guan; Rose M Caratozzolo; Rafal Goraczniak; Eric S Ho; Samuel I Gunderson
Journal:  RNA       Date:  2007-10-17       Impact factor: 4.942

Review 4.  3' end mRNA processing: molecular mechanisms and implications for health and disease.

Authors:  Sven Danckwardt; Matthias W Hentze; Andreas E Kulozik
Journal:  EMBO J       Date:  2008-02-06       Impact factor: 11.598

5.  Alternative polyadenylation signals in the 3' non-coding region of a voltage-gated potassium channel gene are major determinants of mRNA isoform expression.

Authors:  Gwendolyn M Jang; Brian S Tanaka; George A Gutman; Alan L Goldin; Bert L Semler
Journal:  Gene       Date:  2007-11-06       Impact factor: 3.688

Review 6.  Implications of polyadenylation in health and disease.

Authors:  Ana Curinha; Sandra Oliveira Braz; Isabel Pereira-Castro; Andrea Cruz; Alexandra Moreira
Journal:  Nucleus       Date:  2014-10-31       Impact factor: 4.197

7.  The role of RNA structure in the interaction of U1A protein with U1 hairpin II RNA.

Authors:  Michael J Law; Andrew J Rice; Patti Lin; Ite A Laird-Offringa
Journal:  RNA       Date:  2006-05-31       Impact factor: 4.942

8.  A functional human Poly(A) site requires only a potent DSE and an A-rich upstream sequence.

Authors:  Nuno Miguel Nunes; Wencheng Li; Bin Tian; André Furger
Journal:  EMBO J       Date:  2010-03-25       Impact factor: 11.598

9.  U1A regulates 3' processing of the survival motor neuron mRNA.

Authors:  Eileen Workman; Alex Veith; Daniel J Battle
Journal:  J Biol Chem       Date:  2013-12-20       Impact factor: 5.157

Review 10.  Molecular mechanisms of eukaryotic pre-mRNA 3' end processing regulation.

Authors:  Stefania Millevoi; Stéphan Vagner
Journal:  Nucleic Acids Res       Date:  2009-12-30       Impact factor: 16.971

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