Literature DB >> 15225715

Aptamer selection for the inhibition of cell adhesion with fibronectin as target.

Atsushi Ogawa1, Naotoshi Tomita, Naoko Kikuchi, Shinsuke Sando, Yasuhiro Aoyama.   

Abstract

An affinity column immobilizing a decapeptide H(2)N-RGDSPASSKP-CO(2)H was used to select RGD-binding aptamers from a pool of 86-mer single-strand oligodeoxynucleotides (ODNs) containing a random 40-mer sequence. The enriched library thus obtained was further selected against adsorbed fibronectin and individual aptamers were monocloned in E. coli and sequenced to give a couple of highly homologous ODNs, which indeed inhibited fibronectin-integrin mediated cell adhesion.

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Year:  2004        PMID: 15225715     DOI: 10.1016/j.bmcl.2004.05.042

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  8 in total

Review 1.  Molecular diagnostic and drug delivery agents based on aptamer-nanomaterial conjugates.

Authors:  Jung Heon Lee; Mehmet V Yigit; Debapriya Mazumdar; Yi Lu
Journal:  Adv Drug Deliv Rev       Date:  2010-03-22       Impact factor: 15.470

2.  A mathematical analysis of SELEX.

Authors:  Howard A Levine; Marit Nilsen-Hamilton
Journal:  Comput Biol Chem       Date:  2007-01-10       Impact factor: 2.877

Review 3.  Functional nucleic acid sensors.

Authors:  Juewen Liu; Zehui Cao; Yi Lu
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

4.  Screening and initial binding assessment of fumonisin b(1) aptamers.

Authors:  Maureen McKeague; Charlotte R Bradley; Annalisa De Girolamo; Angelo Visconti; J David Miller; Maria C Derosa
Journal:  Int J Mol Sci       Date:  2010-11-26       Impact factor: 5.923

5.  RiboaptDB: a comprehensive database of ribozymes and aptamers.

Authors:  Venkata Thodima; Mehdi Pirooznia; Youping Deng
Journal:  BMC Bioinformatics       Date:  2006-09-06       Impact factor: 3.169

6.  Local neutral networks help maintain inaccurately replicating ribozymes.

Authors:  András Szilágyi; Ádám Kun; Eörs Szathmáry
Journal:  PLoS One       Date:  2014-10-09       Impact factor: 3.240

Review 7.  Bioanalytical methods for circulating extracellular matrix-related proteins: new opportunities in cancer diagnosis.

Authors:  Ramón Lorenzo-Gómez; Rebeca Miranda-Castro; Noemí de-Los-Santos-Álvarez; María Jesús Lobo-Castañón
Journal:  Anal Bioanal Chem       Date:  2021-06-05       Impact factor: 4.142

8.  Aptamer-based molecular recognition of lysergamine, metergoline and small ergot alkaloids.

Authors:  Elsa Rouah-Martin; Jaytry Mehta; Bieke van Dorst; Sarah de Saeger; Peter Dubruel; Bert U W Maes; Filip Lemiere; Erik Goormaghtigh; Devin Daems; Wouter Herrebout; François van Hove; Ronny Blust; Johan Robbens
Journal:  Int J Mol Sci       Date:  2012-12-14       Impact factor: 5.923

  8 in total

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