Literature DB >> 15223349

An enhancer element at the Igf2/H19 locus drives gene expression in both imprinted and non-imprinted tissues.

Marika Charalambous1, Trevelyan R Menheniott, William R Bennett, Sharon M Kelly, Ghislaine Dell, Luisa Dandolo, Andrew Ward.   

Abstract

The insulin-like growth factor 2 (Igf2) gene encodes a potent growth factor that is expressed in multiple tissues during embryonic development. Expression at this locus is mediated by genomic imprinting. In the developing endodermal tissues, imprinting of Igf2 is mediated by the interaction of a set of enhancers downstream of the linked H19 gene with a differentially methylated domain (DMD) that lies approximately 2-4 kb upstream of H19 that has a boundary or insulator function in the hypomethylated state. In the remainder of tissues that express Igf2 and H19, the cis elements that drive their correct expression and imprinting are not well understood. In addition, enhancers driving expression of Igf2 in the choroid plexus and leptomeninges, tissues where the gene is thought not to be imprinted, have not been isolated. Here we show that biallelic (non-imprinted) expression within the choroid plexus is restricted to the epithelium, and we provide evidence that a conserved intergenic region functions as an enhancer for Igf2 both in tissues where the gene is imprinted, and where Igf2 is biallelically expressed. The presence of an enhancer for imprinted tissues in the intergenic region argues for the existence of imprinting controls distinct from the DMD, which may be provided by differential methylation at sites proximal to Igf2.

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Year:  2004        PMID: 15223349     DOI: 10.1016/j.ydbio.2004.04.022

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  20 in total

1.  A complex deoxyribonucleic acid looping configuration associated with the silencing of the maternal Igf2 allele.

Authors:  Xinwen Qiu; Thanh H Vu; Qiucheng Lu; Jian Qun Ling; Tao Li; Aiju Hou; Shu Kui Wang; Hui Ling Chen; Ji Fan Hu; Andrew R Hoffman
Journal:  Mol Endocrinol       Date:  2008-03-20

2.  Intergenic and intronic DNA hypomethylated regions as putative regulators of imprinted domains.

Authors:  Arundhati Bakshi; Corey L Bretz; Terri L Cain; Joomyeong Kim
Journal:  Epigenomics       Date:  2018-03-23       Impact factor: 4.778

Review 3.  Genomic imprinting of the type 3 thyroid hormone deiodinase gene: regulation and developmental implications.

Authors:  Marika Charalambous; Arturo Hernandez
Journal:  Biochim Biophys Acta       Date:  2012-04-04

4.  A novel H19 antisense RNA overexpressed in breast cancer contributes to paternal IGF2 expression.

Authors:  Nathalie Berteaux; Nathalie Aptel; Guy Cathala; Céline Genton; Jean Coll; Anthony Daccache; Nathalie Spruyt; Hubert Hondermarck; Thierry Dugimont; Jean-Jacques Curgy; Thierry Forné; Eric Adriaenssens
Journal:  Mol Cell Biol       Date:  2008-09-15       Impact factor: 4.272

Review 5.  Epigenetic regulation of the Igf2/H19 gene cluster.

Authors:  M Nordin; D Bergman; M Halje; W Engström; A Ward
Journal:  Cell Prolif       Date:  2014-04-16       Impact factor: 6.831

6.  CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2.

Authors:  Sreenivasulu Kurukuti; Vijay Kumar Tiwari; Gholamreza Tavoosidana; Elena Pugacheva; Adele Murrell; Zhihu Zhao; Victor Lobanenkov; Wolf Reik; Rolf Ohlsson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-30       Impact factor: 11.205

7.  Long-range chromatin interactions at the mouse Igf2/H19 locus reveal a novel paternally expressed long non-coding RNA.

Authors:  Franck Court; Marion Baniol; Hélène Hagege; Julie Sandrine Petit; Marie-Noëlle Lelay-Taha; Françoise Carbonell; Michael Weber; Guy Cathala; Thierry Forne
Journal:  Nucleic Acids Res       Date:  2011-04-07       Impact factor: 16.971

8.  A first-stage approximation to identify new imprinted genes through sequence analysis of its coding regions.

Authors:  Elias Daura-Oller; Maria Cabré; Miguel A Montero; José L Paternáin; Antoni Romeu
Journal:  Comp Funct Genomics       Date:  2009-04-08

9.  Cohesin is required for higher-order chromatin conformation at the imprinted IGF2-H19 locus.

Authors:  Raffaella Nativio; Kerstin S Wendt; Yoko Ito; Joanna E Huddleston; Santiago Uribe-Lewis; Kathryn Woodfine; Christel Krueger; Wolf Reik; Jan-Michael Peters; Adele Murrell
Journal:  PLoS Genet       Date:  2009-11-26       Impact factor: 5.917

10.  Induced DNA demethylation can reshape chromatin topology at the IGF2-H19 locus.

Authors:  Yoko Ito; Raffaella Nativio; Adele Murrell
Journal:  Nucleic Acids Res       Date:  2013-04-12       Impact factor: 16.971

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