Literature DB >> 15221479

Crystallographic evidence for a CO/CO(2) tunnel gating mechanism in the bifunctional carbon monoxide dehydrogenase/acetyl coenzyme A synthase from Moorella thermoacetica.

Anne Volbeda1, Juan C Fontecilla-Camps.   

Abstract

Acetyl coenzyme A synthase (ACS) acts in concert with carbon monoxide dehydrogenase (CODH) to catalyze the formation of acetyl-coenzyme A from CO(2)-derived CO and CH(3)(+) molecules. Recent crystal structures have shown that the three globular domains constituting the ACS subunit may be arranged in either a closed or an open conformation. A long hydrophobic tunnel network allows diffusion of CO between the CODH and the ACS active sites in the closed form, but it is blocked in the open form. On the other hand, the active site of ACS is only accessible for coenzyme A and the methyl donating protein in the open domain conformation. Although several metal compositions have been observed for this active site, present consensus is that it consists of a Ni-Ni-[Fe(4)S(4)] cluster. The observed conformational changes of ACS and the resulting different substrate accessibilities of the catalytic central nickel are reviewed here in the context of a putative CO(2)/CO tunnel gating mechanism.

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Year:  2004        PMID: 15221479     DOI: 10.1007/s00775-004-0565-9

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  35 in total

1.  Nickel in subunit beta of the acetyl-CoA decarbonylase/synthase multienzyme complex in methanogens. Catalytic properties and evidence for a binuclear Ni-Ni site.

Authors:  Simonida Gencic; David A Grahame
Journal:  J Biol Chem       Date:  2002-12-02       Impact factor: 5.157

2.  Influence of Sulfur Metalation on the Accessibility of the Ni(II/I) Couple in [N,N'-Bis(2-mercaptoethyl)-1,5-diazacyclooctanato]nickel(II): Insight into the Redox Properties of [NiFe]-Hydrogenase.

Authors:  Ghezai Musie; Patrick J. Farmer; Thawatchai Tuntulani; Joseph H. Reibenspies; Marcetta Y. Darensbourg
Journal:  Inorg Chem       Date:  1996-04-10       Impact factor: 5.165

3.  Catalysis of acetyl-CoA cleavage and tetrahydrosarcinapterin methylation by a carbon monoxide dehydrogenase-corrinoid enzyme complex.

Authors:  D A Grahame
Journal:  J Biol Chem       Date:  1991-11-25       Impact factor: 5.157

4.  Carbon monoxide dehydrogenase from Clostridium thermoaceticum: quaternary structure, stoichiometry of its SDS-induced dissociation, and characterization of the faster-migrating form.

Authors:  J Xia; J F Sinclair; T O Baldwin; P A Lindahl
Journal:  Biochemistry       Date:  1996-02-13       Impact factor: 3.162

5.  Partial reactions catalyzed by protein components of the acetyl-CoA decarbonylase synthase enzyme complex from Methanosarcina barkeri.

Authors:  D A Grahame; E DeMoll
Journal:  J Biol Chem       Date:  1996-04-05       Impact factor: 5.157

Review 6.  The autotrophic pathway of acetate synthesis in acetogenic bacteria.

Authors:  L G Ljungdahl
Journal:  Annu Rev Microbiol       Date:  1986       Impact factor: 15.500

7.  A new pathway of autotrophic growth utilizing carbon monoxide or carbon dioxide and hydrogen.

Authors:  H G Wood; S W Ragsdale; E Pezacka
Journal:  Biochem Int       Date:  1986-03

8.  Rapid kinetic studies of acetyl-CoA synthesis: evidence supporting the catalytic intermediacy of a paramagnetic NiFeC species in the autotrophic Wood-Ljungdahl pathway.

Authors:  Javier Seravalli; Manoj Kumar; Stephen W Ragsdale
Journal:  Biochemistry       Date:  2002-02-12       Impact factor: 3.162

9.  Catalytic coupling of the active sites in acetyl-CoA synthase, a bifunctional CO-channeling enzyme.

Authors:  E L Maynard; P A Lindahl
Journal:  Biochemistry       Date:  2001-11-06       Impact factor: 3.162

10.  Computational studies on the A cluster of acetyl-coenzyme A synthase: geometric and electronic properties of the NiFeC species and mechanistic implications.

Authors:  Ralph P Schenker; Thomas C Brunold
Journal:  J Am Chem Soc       Date:  2003-11-19       Impact factor: 15.419

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  13 in total

1.  Nickel-dependent oligomerization of the alpha subunit of acetyl-coenzyme a synthase/carbon monoxide dehydrogenase.

Authors:  Xiangshi Tan; Ioannis Kagiampakis; Ivan V Surovtsev; Borries Demeler; Paul A Lindahl
Journal:  Biochemistry       Date:  2007-09-22       Impact factor: 3.162

2.  Pulse-chase studies of the synthesis of acetyl-CoA by carbon monoxide dehydrogenase/acetyl-CoA synthase: evidence for a random mechanism of methyl and carbonyl addition.

Authors:  Javier Seravalli; Stephen W Ragsdale
Journal:  J Biol Chem       Date:  2008-01-18       Impact factor: 5.157

3.  Heterologous Expression of the Clostridium carboxidivorans CO Dehydrogenase Alone or Together with the Acetyl Coenzyme A Synthase Enables both Reduction of CO2 and Oxidation of CO by Clostridium acetobutylicum.

Authors:  Ellinor D Carlson; Eleftherios T Papoutsakis
Journal:  Appl Environ Microbiol       Date:  2017-08-01       Impact factor: 4.792

Review 4.  Metal centers in the anaerobic microbial metabolism of CO and CO2.

Authors:  Güneş Bender; Elizabeth Pierce; Jeffrey A Hill; Joseph E Darty; Stephen W Ragsdale
Journal:  Metallomics       Date:  2011-06-06       Impact factor: 4.526

5.  Function of the tunnel in acetylcoenzyme A synthase/carbon monoxide dehydrogenase.

Authors:  Xiangshi Tan; Anne Volbeda; Juan C Fontecilla-Camps; Paul A Lindahl
Journal:  J Biol Inorg Chem       Date:  2006-02-24       Impact factor: 3.358

6.  Tight coupling of partial reactions in the acetyl-CoA decarbonylase/synthase (ACDS) multienzyme complex from Methanosarcina thermophila: acetyl C-C bond fragmentation at the a cluster promoted by protein conformational changes.

Authors:  Simonida Gencic; Evert C Duin; David A Grahame
Journal:  J Biol Chem       Date:  2010-03-04       Impact factor: 5.157

7.  Spectroscopic studies of the corrinoid/iron-sulfur protein from Moorella thermoacetica.

Authors:  Troy A Stich; Javier Seravalli; Swarnalatha Venkateshrao; Thomas G Spiro; Stephen W Ragsdale; Thomas C Brunold
Journal:  J Am Chem Soc       Date:  2006-04-19       Impact factor: 15.419

8.  Xenon in and at the end of the tunnel of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase.

Authors:  Tzanko I Doukov; Leah C Blasiak; Javier Seravalli; Stephen W Ragsdale; Catherine L Drennan
Journal:  Biochemistry       Date:  2008-02-23       Impact factor: 3.162

9.  Novel domain arrangement in the crystal structure of a truncated acetyl-CoA synthase from Moorella thermoacetica.

Authors:  Anne Volbeda; Claudine Darnault; Xiangshi Tan; Paul A Lindahl; Juan C Fontecilla-Camps
Journal:  Biochemistry       Date:  2009-08-25       Impact factor: 3.162

10.  The binding and release of oxygen and hydrogen peroxide are directed by a hydrophobic tunnel in cholesterol oxidase.

Authors:  Lin Chen; Artem Y Lyubimov; Leighanne Brammer; Alice Vrielink; Nicole S Sampson
Journal:  Biochemistry       Date:  2008-04-15       Impact factor: 3.162

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