Literature DB >> 15215348

WAViS server for handling, visualization and presentation of multiple alignments of nucleotide or amino acids sequences.

Radek Zika1, Jan Paces, Adam Pavlícek, Václav Paces.   

Abstract

Web Alignment Visualization Server contains a set of web-tools designed for quick generation of publication-quality color figures of multiple alignments of nucleotide or amino acids sequences. It can be used for identification of conserved regions and gaps within many sequences using only common web browsers. The server is accessible at http://wavis.img.cas.cz.

Mesh：

Year:  2004        PMID： 15215348      PMCID： PMC441496          DOI： 10.1093/nar/gkh358

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  6 in total

1.  TEXshade: shading and labeling of multiple sequence alignments using LATEX2 epsilon.

Authors:  E Beitz
Journal:  Bioinformatics       Date:  2000-02       Impact factor: 6.937

2.  NEXUS: an extensible file format for systematic information.

Authors:  D R Maddison; D L Swofford; W P Maddison
Journal:  Syst Biol       Date:  1997-12       Impact factor: 15.683

3.  ESPript: analysis of multiple sequence alignments in PostScript.

Authors:  P Gouet; E Courcelle; D I Stuart; F Métoz
Journal:  Bioinformatics       Date:  1999-04       Impact factor: 6.937

4.  Protein family annotation in a multiple alignment viewer.

Authors:  Jason M Johnson; Keith Mason; Ciamac Moallemi; Hualin Xi; Shyamal Somaroo; Enoch S Huang
Journal:  Bioinformatics       Date:  2003-03-01       Impact factor: 6.937

5.  HERVd: the Human Endogenous RetroViruses Database: update.

Authors:  Jan Paces; Adam Pavlícek; Radek Zika; Vladimir V Kapitonov; Jerzy Jurka; Václav Paces
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

6.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971
  6 in total
  2 in total

1.  Dynamic structure of the SPANX gene cluster mapped to the prostate cancer susceptibility locus HPCX at Xq27.

Authors:  Natalay Kouprina; Adam Pavlicek; Vladimir N Noskov; Greg Solomon; John Otstot; William Isaacs; John D Carpten; Jeffrey M Trent; Joanna Schleutker; J Carl Barrett; Jerzy Jurka; Vladimir Larionov
Journal:  Genome Res       Date:  2005-11       Impact factor: 9.043

2.  Ancient origin of the new developmental superfamily DANGER.

Authors:  Nikolas Nikolaidis; Dimitra Chalkia; D Neil Watkins; Roxanne K Barrow; Solomon H Snyder; Damian B van Rossum; Randen L Patterson
Journal:  PLoS One       Date:  2007-02-14       Impact factor: 3.240
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.