Literature DB >> 15215341

PubCrawler: keeping up comfortably with PubMed and GenBank.

Karsten Hokamp1, Kenneth H Wolfe.   

Abstract

The free PubCrawler web service (http://www.pubcrawler.ie) has been operating for five years and so far has brought literature and sequence updates to over 22 000 users. It provides information on a personalized web page whenever new articles appear in PubMed or when new sequences are found in GenBank that are specific to customized queries. The server also acts as an automatic alerting system by sending out short notifications or emails with the latest updates as soon as they become available. A new output format and more flexibility for the email formatting help PubCrawler cope with increasing challenges arising from browser incompatibilities and mail filters, therefore making it suitable for a wide range of users.

Mesh:

Year:  2004        PMID: 15215341      PMCID: PMC441591          DOI: 10.1093/nar/gkh453

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  4 in total

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Authors:  K Hokamp; K Wolfe
Journal:  Trends Genet       Date:  1999-11       Impact factor: 11.639

2.  Wrapping up BLAST and other applications for use on Unix clusters.

Authors:  Karsten Hokamp; Denis C Shields; Kenneth H Wolfe; Daniel R Caffrey
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3.  MEDLINE SDI services: how do they compare?

Authors:  Mary Shultz; Sandra L De Groote
Journal:  J Med Libr Assoc       Date:  2003-10

4.  Database resources of the National Center for Biotechnology Information: update.

Authors:  David L Wheeler; Deanna M Church; Ron Edgar; Scott Federhen; Wolfgang Helmberg; Thomas L Madden; Joan U Pontius; Gregory D Schuler; Lynn M Schriml; Edwin Sequeira; Tugba O Suzek; Tatiana A Tatusova; Lukas Wagner
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

  4 in total
  15 in total

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Journal:  Comput Biol Med       Date:  2008-04-09       Impact factor: 4.589

2.  Method for tracking core-contributed publications.

Authors:  Cynthia A Loomis; Carol Lynn Curchoe
Journal:  J Biomol Tech       Date:  2012-12

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Authors:  Muntaha Samad; Forest Agostinelli; Tomoki Sato; Kohei Shimaji; Pierre Baldi
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4.  Text mining for identification of biological entities related to antibiotic resistant organisms.

Authors:  Kelle Fortunato Costa; Fabrício Almeida Araújo; Jefferson Morais; Carlos Renato Lisboa Frances; Rommel T J Ramos
Journal:  PeerJ       Date:  2022-05-05       Impact factor: 3.061

Review 5.  Candidate gene association studies: a comprehensive guide to useful in silico tools.

Authors:  Radhika Patnala; Judith Clements; Jyotsna Batra
Journal:  BMC Genet       Date:  2013-05-09       Impact factor: 2.797

Review 6.  PubMed and beyond: a survey of web tools for searching biomedical literature.

Authors:  Zhiyong Lu
Journal:  Database (Oxford)       Date:  2011-01-18       Impact factor: 3.451

7.  CryptoDB: a Cryptosporidium bioinformatics resource update.

Authors:  Mark Heiges; Haiming Wang; Edward Robinson; Cristina Aurrecoechea; Xin Gao; Nivedita Kaluskar; Philippa Rhodes; Sammy Wang; Cong-Zhou He; Yanqi Su; John Miller; Eileen Kraemer; Jessica C Kissinger
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

8.  ApiDB: integrated resources for the apicomplexan bioinformatics resource center.

Authors:  Cristina Aurrecoechea; Mark Heiges; Haiming Wang; Zhiming Wang; Steve Fischer; Philippa Rhodes; John Miller; Eileen Kraemer; Christian J Stoeckert; David S Roos; Jessica C Kissinger
Journal:  Nucleic Acids Res       Date:  2006-11-10       Impact factor: 16.971

9.  BSRD: a repository for bacterial small regulatory RNA.

Authors:  Lei Li; Dandan Huang; Man Kit Cheung; Wenyan Nong; Qianli Huang; Hoi Shan Kwan
Journal:  Nucleic Acids Res       Date:  2012-11-29       Impact factor: 16.971

10.  ALFRED: an allele frequency database for microevolutionary studies.

Authors:  Haseena Rajeevan; Kei-Hoi Cheung; Rohit Gadagkar; Shannon Stein; Usha Soundararajan; Judith R Kidd; Andrew J Pakstis; Perry L Miller; Kenneth K Kidd
Journal:  Evol Bioinform Online       Date:  2007-02-22       Impact factor: 1.625

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