| Literature DB >> 12584141 |
Karsten Hokamp1, Denis C Shields, Kenneth H Wolfe, Daniel R Caffrey.
Abstract
UNLABELLED: We have developed two programs that speed up common bioinformatic applications by spreading them across a UNIX cluster.(1) BLAST.pm, a new module for the 'MOLLUSC' package. (2) WRAPID, a simple tool for parallelizing large numbers of small instances of programs such as BLAST, FASTA and CLUSTALW. AVAILABILITY: The packages were developed in Perl on a 20-node Linux cluster and are provided together with a configuration script and documentation. They can be freely downloaded from http://wolfe.gen.tcd.ie/wrapper.Mesh:
Year: 2003 PMID: 12584141 DOI: 10.1093/bioinformatics/btg007
Source DB: PubMed Journal: Bioinformatics ISSN: 1367-4803 Impact factor: 6.937