Literature DB >> 15196890

Site-specific DNA damage recognition by enzyme-induced base flipping.

James T Stivers1.   

Abstract

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Year:  2004        PMID： 15196890     DOI： 10.1016/S0079-6603(04)77002-6

Source DB:  PubMed          Journal:  Prog Nucleic Acid Res Mol Biol        ISSN： 0079-6603


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  35 in total

1.  An unprecedented nucleic acid capture mechanism for excision of DNA damage.

Authors:  Emily H Rubinson; A S Prakasha Gowda; Thomas E Spratt; Barry Gold; Brandt F Eichman
Journal:  Nature       Date:  2010-10-03       Impact factor: 49.962

2.  Sequence-dependent base pair opening in DNA double helix.

Authors:  Andrew Krueger; Ekaterina Protozanova; Maxim D Frank-Kamenetskii
Journal:  Biophys J       Date:  2006-02-24       Impact factor: 4.033

3.  Conserved patterns in backbone torsional changes allow for single base flipping from duplex DNA with minimal distortion of the double helix.

Authors:  Nilesh K Banavali; Niu Huang; Alexander D MacKerell
Journal:  J Phys Chem B       Date:  2006-06-08       Impact factor: 2.991

Review 4.  Base-excision repair of oxidative DNA damage.

Authors:  Sheila S David; Valerie L O'Shea; Sucharita Kundu
Journal:  Nature       Date:  2007-06-21       Impact factor: 49.962

5.  A molecular dynamics study of slow base flipping in DNA using conformational flooding.

Authors:  Benjamin Bouvier; Helmut Grubmüller
Journal:  Biophys J       Date:  2007-05-11       Impact factor: 4.033

Review 6.  Extrahelical damaged base recognition by DNA glycosylase enzymes.

Authors:  James T Stivers
Journal:  Chemistry       Date:  2008       Impact factor: 5.236

7.  Base flipping in V(D)J recombination: insights into the mechanism of hairpin formation, the 12/23 rule, and the coordination of double-strand breaks.

Authors:  Julien Bischerour; Catherine Lu; David B Roth; Ronald Chalmers
Journal:  Mol Cell Biol       Date:  2009-08-31       Impact factor: 4.272

8.  The catalytic power of uracil DNA glycosylase in the opening of thymine base pairs.

Authors:  Chunyang Cao; Yu Lin Jiang; Daniel J Krosky; James T Stivers
Journal:  J Am Chem Soc       Date:  2006-10-11       Impact factor: 15.419

9.  A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.

Authors:  Paul C Blainey; Antoine M van Oijen; Anirban Banerjee; Gregory L Verdine; X Sunney Xie
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-03       Impact factor: 11.205

10.  Base flipping in tn10 transposition: an active flip and capture mechanism.

Authors:  Julien Bischerour; Ronald Chalmers
Journal:  PLoS One       Date:  2009-07-10       Impact factor: 3.240
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