Literature DB >> 15194233

Molecular adaptation: the malate dehydrogenase from the extreme halophilic bacterium Salinibacter ruber behaves like a non-halophilic protein.

Dominique Madern1, Giuseppe Zaccai.   

Abstract

Malate dehydrogenase from the extreme halophilic bacterium, Salinibacter ruber (Sr MalDH) was purified and characterised as a tetramer by sedimentation velocity measurements, showing the enzyme belongs to the LDH-like group of MalDHs. In contrast to most other halophilic enzymes, which unfold when incubated at low salt concentration, Sr MalDH is completely stable in absence of salt. Its amino acid composition does not display the strong acidic character specific of halophilic proteins. The enzyme displays a strong KCl-concentration dependent variation in K(m) for oxaloacetate, but not for the NADH co-factor. Its activity is reduced by high salt concentration, but remains sufficient for the enzyme to sustain catalysis at approximately 30% of its maximal rates in 3 M KCl. The properties of the protein were compared with those from other LDH-like MalDHs of bacterial and archaeal origins, showing that Sr MalDH in fact behaves like a non-halophilic enzyme.

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Year:  2004        PMID: 15194233     DOI: 10.1016/j.biochi.2004.04.004

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  10 in total

1.  Three-dimensional structure of a halotolerant algal carbonic anhydrase predicts halotolerance of a mammalian homolog.

Authors:  Lakshmanane Premkumar; Harry M Greenblatt; Umesh K Bageshwar; Tatyana Savchenko; Irena Gokhman; Joel L Sussman; Ada Zamir
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-13       Impact factor: 11.205

2.  An extremely halophilic proteobacterium combines a highly acidic proteome with a low cytoplasmic potassium content.

Authors:  Ratnakar Deole; Jean Challacombe; Douglas W Raiford; Wouter D Hoff
Journal:  J Biol Chem       Date:  2012-11-09       Impact factor: 5.157

3.  Salt-dependent studies of NADP-dependent isocitrate dehydrogenase from the halophilic archaeon Haloferax volcanii.

Authors:  Dominique Madern; Mónica Camacho; Adoración Rodríguez-Arnedo; María-José Bonete; Giuseppe Zaccai
Journal:  Extremophiles       Date:  2004-06-18       Impact factor: 2.395

4.  Proteins maintain hydration at high [KCl] concentration regardless of content in acidic amino acids.

Authors:  Hosein Geraili Daronkola; Ana Vila Verde
Journal:  Biophys J       Date:  2021-06-02       Impact factor: 3.699

5.  Intrinsic halotolerance of the psychrophilic alpha-amylase from Pseudoalteromonas haloplanktis.

Authors:  Soundararajan Srimathi; Gurunathan Jayaraman; Georges Feller; Bengt Danielsson; Paranji R Narayanan
Journal:  Extremophiles       Date:  2007-02-20       Impact factor: 3.035

6.  Function and biotechnology of extremophilic enzymes in low water activity.

Authors:  Ram Karan; Melinda D Capes; Shiladitya Dassarma
Journal:  Aquat Biosyst       Date:  2012-02-02

7.  An experimental point of view on hydration/solvation in halophilic proteins.

Authors:  Romain Talon; Nicolas Coquelle; Dominique Madern; Eric Girard
Journal:  Front Microbiol       Date:  2014-02-21       Impact factor: 5.640

Review 8.  Protective role of salt in catalysis and maintaining structure of halophilic proteins against denaturation.

Authors:  Rajeshwari Sinha; Sunil K Khare
Journal:  Front Microbiol       Date:  2014-04-09       Impact factor: 5.640

9.  A genome-scale metabolic network reconstruction of extremely halophilic bacterium Salinibacter ruber.

Authors:  Maryam Bagheri; Sayed-Amir Marashi; Mohammad Ali Amoozegar
Journal:  PLoS One       Date:  2019-05-09       Impact factor: 3.240

10.  ADP-Dependent Kinases From the Archaeal Order Methanosarcinales Adapt to Salt by a Non-canonical Evolutionarily Conserved Strategy.

Authors:  Felipe Gonzalez-Ordenes; Pablo A Cea; Nicolás Fuentes-Ugarte; Sebastián M Muñoz; Ricardo A Zamora; Diego Leonardo; Richard C Garratt; Victor Castro-Fernandez; Victoria Guixé
Journal:  Front Microbiol       Date:  2018-06-26       Impact factor: 5.640

  10 in total

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