Literature DB >> 15189857

Kinetic analysis of a model for double substrate cycling: highly amplified ADP (and/or ATP) quantification.

Edelmira Valero1, Ramon Varon, Francisco Garcia-Carmona.   

Abstract

A mathematical description has been made of an enzyme amplification mechanism involving the coupling of two substrate cycles. In this amplification system one of the noncycling products of a first substrate cycle acts as a trigger molecule that continuously feeds a second substrate cycle. Time-concentration equations describing the evolution of the species involved in the system have been obtained. The model is illustrated by the quantification of nanomolar levels of ADP (and/or ATP) in a continuous assay involving the enzymes L-lactate dehydrogenase and L-lactate oxidase to cycle the pyruvate accumulated in a first enzymatic cycle constituted by the enzymes pyruvate kinase and hexokinase. Progress curves were seen to be parabolic, and, according to the kinetic equations obtained, followed second-order polynomials of the reaction time. Mathematical equations for minimizing the cost of the assays are also given. The model is applicable to the amplified analytical determination of low levels of a metabolite or an enzyme activity, and its amplification capacity, together with the simplicity of determining kinetic parameters, enable it to be employed in enzyme immunoassays to increase the magnitude of the measured response.

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Year:  2004        PMID: 15189857      PMCID: PMC1304262          DOI: 10.1529/biophysj.103.035956

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  15 in total

1.  An enzymatic cycling method using pyruvate orthophosphate dikinase and firefly luciferase for the simultaneous determination of ATP and AMP (RNA).

Authors:  T Sakakibara; S Murakami; N Eisaki; M Nakajima; K Imai
Journal:  Anal Biochem       Date:  1999-03-01       Impact factor: 3.365

2.  A continuous spectrophotometric method based on enzymatic cycling for determining L-glutamate.

Authors:  E Valero; F Garcia-Carmona
Journal:  Anal Biochem       Date:  1998-06-01       Impact factor: 3.365

3.  Optimizing enzymatic cycling assays: spectrophotometric determination of low levels of pyruvate and L-lactate.

Authors:  E Valero; F García-Carmona
Journal:  Anal Biochem       Date:  1996-07-15       Impact factor: 3.365

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Authors:  R Stambaugh; D Post
Journal:  J Biol Chem       Date:  1966-04-10       Impact factor: 5.157

5.  Enzyme amplification for immunoassays. Detection limit of one hundredth of an attomole.

Authors:  A Johannsson; D H Ellis; D L Bates; A M Plumb; C J Stanley
Journal:  J Immunol Methods       Date:  1986-02-27       Impact factor: 2.303

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Authors:  K Naka
Journal:  Clin Chem       Date:  1993-11       Impact factor: 8.327

7.  Substrate cycling between triglyceride and fatty acid in human adipocytes.

Authors:  V A Hammond; D G Johnston
Journal:  Metabolism       Date:  1987-04       Impact factor: 8.694

8.  On-line enzymatic amplification by substrate cycling in a dual bioreactor with rotation and amperometric detection.

Authors:  J Raba; H A Mottola
Journal:  Anal Biochem       Date:  1994-08-01       Impact factor: 3.365

Review 9.  Substrate cycles: their metabolic, energetic and thermic consequences in man.

Authors:  E A Newsholme
Journal:  Biochem Soc Symp       Date:  1978

10.  Kinetic study of an enzymic cycling system coupled to an enzymic step: determination of alkaline phosphatase activity.

Authors:  E Valero; R Varón; F García-Carmona
Journal:  Biochem J       Date:  1995-07-01       Impact factor: 3.857

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  4 in total

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Journal:  Sci Rep       Date:  2019-11-20       Impact factor: 4.379

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Authors:  Justine Pallu; Charlie Rabin; Pan Hui; Thamires S Moreira; Geordie Creste; Corentin Calvet; Benoît Limoges; François Mavré; Mathieu Branca
Journal:  Chem Sci       Date:  2022-02-11       Impact factor: 9.825

3.  A fluorescence-coupled assay for gamma aminobutyric acid (GABA) reveals metabolic stress-induced modulation of GABA content in neuroendocrine cancer.

Authors:  Joseph E Ippolito; David Piwnica-Worms
Journal:  PLoS One       Date:  2014-02-13       Impact factor: 3.240

4.  Modeling the ascorbate-glutathione cycle in chloroplasts under light/dark conditions.

Authors:  Edelmira Valero; Hermenegilda Macià; Ildefonso M De la Fuente; José-Antonio Hernández; María-Isabel González-Sánchez; Francisco García-Carmona
Journal:  BMC Syst Biol       Date:  2016-01-22
  4 in total

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