Literature DB >> 15184119

Protein engineering of toluene-o-xylene monooxygenase from Pseudomonas stutzeri OX1 for synthesizing 4-methylresorcinol, methylhydroquinone, and pyrogallol.

Gönül Vardar1, Thomas K Wood.   

Abstract

Toluene-o-xylene monooxygenase (ToMO) from Pseudomonas stutzeri OX1 oxidizes toluene to 3- and 4-methylcatechol and oxidizes benzene to form phenol; in this study ToMO was found to also form catechol and 1,2,3-trihydroxybenzene (1,2,3-THB) from phenol. To synthesize novel dihydroxy and trihydroxy derivatives of benzene and toluene, DNA shuffling of the alpha-hydroxylase fragment of ToMO (TouA) and saturation mutagenesis of the TouA active site residues I100, Q141, T201, and F205 were used to generate random mutants. The mutants were initially identified by screening with a rapid agar plate assay and then were examined further by high-performance liquid chromatography and gas chromatography. Several regiospecific mutants with high rates of activity were identified; for example, Escherichia coli TG1/pBS(Kan)ToMO expressing the F205G TouA saturation mutagenesis variant formed 4-methylresorcinol (0.78 nmol/min/mg of protein), 3-methylcatechol (0.25 nmol/min/mg of protein), and methylhydroquinone (0.088 nmol/min/mg of protein) from o-cresol, whereas wild-type ToMO formed only 3-methylcatechol (1.1 nmol/min/mg of protein). From o-cresol, the I100Q saturation mutagenesis mutant and the M180T/E284G DNA shuffling mutant formed methylhydroquinone (0.50 and 0.19 nmol/min/mg of protein, respectively) and 3-methylcatechol (0.49 and 1.5 nmol/min/mg of protein, respectively). The F205G mutant formed catechol (0.52 nmol/min/mg of protein), resorcinol (0.090 nmol/min/mg of protein), and hydroquinone (0.070 nmol/min/mg of protein) from phenol, whereas wild-type ToMO formed only catechol (1.5 nmol/min/mg of protein). Both the I100Q mutant and the M180T/E284G mutant formed hydroquinone (1.2 and 0.040 nmol/min/mg of protein, respectively) and catechol (0.28 and 2.0 nmol/min/mg of protein, respectively) from phenol. Dihydroxybenzenes were further oxidized to trihydroxybenzenes with different regiospecificities; for example, the I100Q mutant formed 1,2,4-THB from catechol, whereas wild-type ToMO formed 1,2,3-THB (pyrogallol). Regiospecific oxidation of the natural substrate toluene was also checked; for example, the I100Q mutant formed 22% o-cresol, 44% m-cresol, and 34% p-cresol, whereas wild-type ToMO formed 32% o-cresol, 21% m-cresol, and 47% p-cresol.

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Year:  2004        PMID: 15184119      PMCID: PMC427803          DOI: 10.1128/AEM.70.6.3253-3262.2004

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  23 in total

Review 1.  Practical issues in the application of oxygenases.

Authors:  Jan B van Beilen; Wouter A Duetz; Andreas Schmid; Bernard Witholt
Journal:  Trends Biotechnol       Date:  2003-04       Impact factor: 19.536

2.  Expression and purification of the recombinant subunits of toluene/o-xylene monooxygenase and reconstitution of the active complex.

Authors:  Valeria Cafaro; Roberta Scognamiglio; Ambra Viggiani; Viviana Izzo; Irene Passaro; Eugenio Notomista; Fabrizio Dal Piaz; Angela Amoresano; Annarita Casbarra; Piero Pucci; Alberto Di Donato
Journal:  Eur J Biochem       Date:  2002-11

3.  SWISS-MODEL: An automated protein homology-modeling server.

Authors:  Torsten Schwede; Jürgen Kopp; Nicolas Guex; Manuel C Peitsch
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

4.  Saturation mutagenesis of toluene ortho-monooxygenase of Burkholderia cepacia G4 for Enhanced 1-naphthol synthesis and chloroform degradation.

Authors:  Lingyun Rui; Young Man Kwon; Ayelet Fishman; Kenneth F Reardon; Thomas K Wood
Journal:  Appl Environ Microbiol       Date:  2004-06       Impact factor: 4.792

5.  Exploring nonnatural evolutionary pathways by saturation mutagenesis: rapid improvement of protein function.

Authors:  K Miyazaki; F H Arnold
Journal:  J Mol Evol       Date:  1999-12       Impact factor: 2.395

6.  Directed evolution of toluene ortho-monooxygenase for enhanced 1-naphthol synthesis and chlorinated ethene degradation.

Authors:  Keith A Canada; Sachiyo Iwashita; Hojae Shim; Thomas K Wood
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

7.  Changing the substrate reactivity of 2-hydroxybiphenyl 3-monooxygenase from Pseudomonas azelaica HBP1 by directed evolution.

Authors:  Andreas Meyer; Andreas Schmid; Martin Held; Adrie H Westphal; Martina Rothlisberger; Hans-Peter E Kohler; Willem J H van Berkel; Bernard Witholt
Journal:  J Biol Chem       Date:  2001-12-03       Impact factor: 5.157

8.  Laboratory evolution of toluene dioxygenase to accept 4-picoline as a substrate.

Authors:  T Sakamoto; J M Joern; A Arisawa; F H Arnold
Journal:  Appl Environ Microbiol       Date:  2001-09       Impact factor: 4.792

9.  Aerobic degradation of tetrachloroethylene by toluene-o-xylene monooxygenase of Pseudomonas stutzeri OX1.

Authors:  D Ryoo; H Shim; K Canada; P Barbieri; T K Wood
Journal:  Nat Biotechnol       Date:  2000-07       Impact factor: 54.908

10.  Cloning of the genes for and characterization of the early stages of toluene and o-xylene catabolism in Pseudomonas stutzeri OX1.

Authors:  G Bertoni; F Bolognese; E Galli; P Barbieri
Journal:  Appl Environ Microbiol       Date:  1996-10       Impact factor: 4.792

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  24 in total

1.  Identification of the monooxygenase gene clusters responsible for the regioselective oxidation of phenol to hydroquinone in mycobacteria.

Authors:  Toshiki Furuya; Satomi Hirose; Hisashi Osanai; Hisashi Semba; Kuniki Kino
Journal:  Appl Environ Microbiol       Date:  2010-12-23       Impact factor: 4.792

2.  Epoxide formation on the aromatic B ring of flavanone by biphenyl dioxygenase of Pseudomonas pseudoalcaligenes KF707.

Authors:  Jaehong Han; Song-Young Kim; Jihyun Jung; Yoongho Lim; Joong-Hoon Ahn; Su-Il Kim; Hor-Gil Hur
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

3.  Alpha-subunit positions methionine 180 and glutamate 214 of Pseudomonas stutzeri OX1 toluene-o-xylene monooxygenase influence catalysis.

Authors:  Gönül Vardar; Thomas K Wood
Journal:  J Bacteriol       Date:  2005-02       Impact factor: 3.490

Review 4.  Laboratory-directed protein evolution.

Authors:  Ling Yuan; Itzhak Kurek; James English; Robert Keenan
Journal:  Microbiol Mol Biol Rev       Date:  2005-09       Impact factor: 11.056

5.  Dioxygen-initiated oxidation of heteroatomic substrates incorporated into ancillary pyridine ligands of carboxylate-rich diiron(II) complexes.

Authors:  Emily C Carson; Stephen J Lippard
Journal:  Inorg Chem       Date:  2006-01-23       Impact factor: 5.165

6.  Synthesis, characterization, and preliminary oxygenation studies of benzyl- and ethyl-substituted pyridine ligands of carboxylate-rich diiron(II) complexes.

Authors:  Emily C Carson; Stephen J Lippard
Journal:  Inorg Chem       Date:  2006-01-23       Impact factor: 5.165

7.  Regiospecificity of two multicomponent monooxygenases from Pseudomonas stutzeri OX1: molecular basis for catabolic adaptation of this microorganism to methylated aromatic compounds.

Authors:  Valeria Cafaro; Eugenio Notomista; Paola Capasso; Alberto Di Donato
Journal:  Appl Environ Microbiol       Date:  2005-08       Impact factor: 4.792

8.  Molecular determinants of the regioselectivity of toluene/o-xylene monooxygenase from Pseudomonas sp. strain OX1.

Authors:  Eugenio Notomista; Valeria Cafaro; Giuseppe Bozza; Alberto Di Donato
Journal:  Appl Environ Microbiol       Date:  2008-12-12       Impact factor: 4.792

9.  YeeO from Escherichia coli exports flavins.

Authors:  Michael J McAnulty; Thomas K Wood
Journal:  Bioengineered       Date:  2014-11-11       Impact factor: 3.269

10.  Oxidation of benzene to phenol, catechol, and 1,2,3-trihydroxybenzene by toluene 4-monooxygenase of Pseudomonas mendocina KR1 and toluene 3-monooxygenase of Ralstonia pickettii PKO1.

Authors:  Ying Tao; Ayelet Fishman; William E Bentley; Thomas K Wood
Journal:  Appl Environ Microbiol       Date:  2004-07       Impact factor: 4.792

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