Literature DB >> 15182202

The nature of the hydrophobic n-alkanol binding site within the C1 domains of protein kinase Calpha.

Simon J Slater1, Steve A Malinowski, Christopher D Stubbs.   

Abstract

The activator-binding sites within the C1 domains of protein kinase C (PKC) are also able to bind alcohols and anesthetics. In this study, the nature of the interaction of these agents with the hydrophobic region within the C1 domains was investigated and a structure-activity relationship for the alcohol effects was obtained. The effects of a series of n-alkanols on PKCalpha activity, determined using an in vitro assay system that lacked lipids, were found to be a nonlinear function of the chain length. In the absence of phorbol ester or diacylglycerol, 1-octanol potently activated PKCalpha in a concentration-dependent manner, while 1-heptanol was completely without effect, despite differing by one methylene unit. The minimal structural requirement for the activating effect corresponded to R-CH(OH)-(CH(2))(n)-CH(3), where R = H or an alkyl group and n >or= 6. Consistent with this, 2-octanol, for which n = 5, was without effect on the activity, even though this alcohol is only marginally less hydrophobic than 1-octanol, whereas 2-nonanol, for which n = 6, was able to produce activity. Importantly, it was found that PKCalpha was activated to a greater extent by R-2-nonanol than by the S enantiomer. The potentiation of phorbol ester-induced, membrane-associated PKCalpha activity by long-chain n-alkanols reported previously (Slater, S. J., Kelly, M. B., Larkin, J. D., Ho, C, Mazurek, A, Taddeo, F. J., Yeager, M. D., Stubbs, C. D. (1997) J. Biol. Chem. 272, 6167-6173), was also found here for nonmembrane associated PKC, indicating that this effect is an intrinsic property of the enzyme rather than a result of membrane perturbation. Overall, the results suggest that the alcohol-binding sites within the C1 domains of PKCalpha contain spatially distinct hydrophilic and hydrophobic regions that impose a high degree of structural specificity on the interactions of alcohols and other anesthetic compounds, as well as diacylglycerols and phorbol esters.

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Year:  2004        PMID: 15182202     DOI: 10.1021/bi049755z

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

1.  Identification of an alcohol binding site in the first cysteine-rich domain of protein kinase Cdelta.

Authors:  Joydip Das; Xiaojuan Zhou; Keith W Miller
Journal:  Protein Sci       Date:  2006-09       Impact factor: 6.725

Review 2.  Alcohol-binding sites in distinct brain proteins: the quest for atomic level resolution.

Authors:  Rebecca J Howard; Paul A Slesinger; Daryl L Davies; Joydip Das; James R Trudell; R Adron Harris
Journal:  Alcohol Clin Exp Res       Date:  2011-06-15       Impact factor: 3.455

3.  1H, 13C and 15N NMR assignments of the C1A and C1B subdomains of PKC-delta.

Authors:  Brian P Ziemba; P Ziemba Brian; Jamie C Booth; C Booth Jamie; David N M Jones; Jones N M David
Journal:  Biomol NMR Assign       Date:  2010-12-04       Impact factor: 0.746

4.  Structural and functional characterization of an anesthetic binding site in the second cysteine-rich domain of protein kinase Cδ*.

Authors:  Sivananthaperumal Shanmugasundararaj; Joydip Das; Warren S Sandberg; Xiaojuan Zhou; Dan Wang; Robert O Messing; Karol S Bruzik; Thilo Stehle; Keith W Miller
Journal:  Biophys J       Date:  2012-12-05       Impact factor: 4.033

5.  Interaction of anesthetics with the Rho GTPase regulator Rho GDP dissociation inhibitor.

Authors:  Cojen Ho; Sivananthaperumal Shanmugasundararaj; Keith W Miller; Steve A Malinowski; Anthony C Cook; Simon J Slater
Journal:  Biochemistry       Date:  2008-08-15       Impact factor: 3.162

6.  The role of multiple hydrogen-bonding groups in specific alcohol binding sites in proteins: insights from structural studies of LUSH.

Authors:  Anna B Thode; Schoen W Kruse; Jay C Nix; David N M Jones
Journal:  J Mol Biol       Date:  2008-01-05       Impact factor: 5.469

Review 7.  Insight into intra- and inter-molecular interactions of PKC: design of specific modulators of kinase function.

Authors:  Viktoria Kheifets; Daria Mochly-Rosen
Journal:  Pharmacol Res       Date:  2007-05-03       Impact factor: 7.658

8.  Structural Identification and Systematic Comparison of Phorbol Ester, Dioleoylglycerol, Alcohol and Sevoflurane Binding Sites in PKCδ C1A Domain.

Authors:  Lijie Shi
Journal:  Protein J       Date:  2018-12       Impact factor: 2.371

Review 9.  The neurobiology of alcohol consumption and alcoholism: an integrative history.

Authors:  Boris Tabakoff; Paula L Hoffman
Journal:  Pharmacol Biochem Behav       Date:  2013-10-17       Impact factor: 3.533

  9 in total

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