Literature DB >> 15175429

Total synthesis and structure of the ramoplanin A1 and A3 aglycons: two minor components of the ramoplanin complex.

Dongwoo Shin1, Yosup Rew, Dale L Boger.   

Abstract

Ramoplanin is a potent antibiotic, first disclosed in 1984, that acts by inhibiting bacterial cell-wall biosynthesis. The original ramoplanin complex was shown to consist of a mixture of three closely related compounds, ramoplanin A1-A3, of which ramoplanin A2 is the most abundant. The structure of ramoplanin A2 was unambiguously established first through a series of extensive spectroscopic studies, allowing complete stereochemical assignments and subsequently providing a minor reassignment of the side-chain double-bond stereochemistry and, most recently, through total synthesis of authentic material. Here we report the total syntheses of the aglycons of the minor components of the ramoplanin complex, A1 and A3, which unambiguously establish their structure and provide an expected structural revision for the lipid side-chain double-bond stereochemistry.

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Year:  2004        PMID: 15175429      PMCID: PMC514419          DOI: 10.1073/pnas.0401419101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  A new structure for the substrate-binding antibiotic ramoplanin.

Authors:  M C Lo; J S Helm; G Sarngadharan; I Pelczer; S Walker
Journal:  J Am Chem Soc       Date:  2001-09-05       Impact factor: 15.419

2.  A new and improved method for deglycosidation of glycopeptide antibiotics exemplified with vancomycin, ristocetin, and ramoplanin.

Authors:  Jutta Wanner; Datong Tang; Casey C McComas; Brendan M Crowley; Wanlong Jiang; Jason Moss; Dale L Boger
Journal:  Bioorg Med Chem Lett       Date:  2003-03-24       Impact factor: 2.823

Review 3.  Ramoplanin: a review of its discovery and its chemistry.

Authors:  F Parenti; R Ciabatti; B Cavalleri; J Kettenring
Journal:  Drugs Exp Clin Res       Date:  1990

4.  Total synthesis of the ramoplanin A2 and ramoplanose aglycon.

Authors:  Wanlong Jiang; Jutta Wanner; Richard J Lee; Pierre-Yves Bounaud; Dale L Boger
Journal:  J Am Chem Soc       Date:  2002-05-15       Impact factor: 15.419

Review 5.  Vancomycin, teicoplanin, and ramoplanin: synthetic and mechanistic studies.

Authors:  D L Boger
Journal:  Med Res Rev       Date:  2001-09       Impact factor: 12.944

6.  Comparison of the target sites and mechanisms of action of glycopeptide and lipoglycodepsipeptide antibiotics.

Authors:  P E Reynolds; E A Somner
Journal:  Drugs Exp Clin Res       Date:  1990

7.  Total synthesis of the ramoplanin A2 and ramoplanose aglycon.

Authors:  Wanlong Jiang; Jutta Wanner; Richard J Lee; Pierre-Yves Bounaud; Dale L Boger
Journal:  J Am Chem Soc       Date:  2003-02-19       Impact factor: 15.419

8.  Ramoplanin inhibits bacterial transglycosylases by binding as a dimer to lipid II.

Authors:  Yanan Hu; Jeremiah S Helm; Lan Chen; Xiang-Yang Ye; Suzanne Walker
Journal:  J Am Chem Soc       Date:  2003-07-23       Impact factor: 15.419

9.  Rethinking ramoplanin: the role of substrate binding in inhibition of peptidoglycan biosynthesis.

Authors:  Jeremiah S Helm; Lan Chen; Suzanne Walker
Journal:  J Am Chem Soc       Date:  2002-11-27       Impact factor: 15.419

Review 10.  Chemistry and biology of the ramoplanin family of peptide antibiotics.

Authors:  Dewey G McCafferty; Predrag Cudic; Brenda A Frankel; Salim Barkallah; Ryan G Kruger; Wenkai Li
Journal:  Biopolymers       Date:  2002       Impact factor: 2.505

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  12 in total

Review 1.  Recent advances in the chemistry and biology of naturally occurring antibiotics.

Authors:  K C Nicolaou; Jason S Chen; David J Edmonds; Anthony A Estrada
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

2.  A crystal structure of a dimer of the antibiotic ramoplanin illustrates membrane positioning and a potential Lipid II docking interface.

Authors:  James B Hamburger; Amanda J Hoertz; Amy Lee; Rachel J Senturia; Dewey G McCafferty; Patrick J Loll
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-03       Impact factor: 11.205

3.  Pharmacological properties of NAI-603, a well-tolerated semisynthetic derivative of ramoplanin.

Authors:  Daniela Jabes; Cristina Brunati; GianPaolo Candiani; Simona Riva; Gabriella Romanó; Sonia Maffioli; Rosaria Rossi; Matteo Simone; Eleonora Gaspari; Stefano Donadio
Journal:  Antimicrob Agents Chemother       Date:  2014-01-13       Impact factor: 5.191

4.  The quest for supernatural products: the impact of total synthesis in complex natural products medicinal chemistry.

Authors:  Zhi-Chen Wu; Dale L Boger
Journal:  Nat Prod Rep       Date:  2020-11-10       Impact factor: 13.423

5.  Total synthesis of [Ψ[C(═S)NH]Tpg4]vancomycin aglycon, [Ψ[C(═NH)NH]Tpg4]vancomycin aglycon, and related key compounds: reengineering vancomycin for dual D-Ala-D-Ala and D-Ala-D-Lac binding.

Authors:  Jian Xie; Akinori Okano; Joshua G Pierce; Robert C James; Simon Stamm; Christine M Crane; Dale L Boger
Journal:  J Am Chem Soc       Date:  2012-01-06       Impact factor: 15.419

Review 6.  Cyclic lipodepsipeptides: a new class of antibacterial agents in the battle against resistant bacteria.

Authors:  Nina Bionda; Jean-Philippe Pitteloud; Predrag Cudic
Journal:  Future Med Chem       Date:  2013-07       Impact factor: 3.808

Review 7.  Total Syntheses of Vancomycin-Related Glycopeptide Antibiotics and Key Analogues.

Authors:  Akinori Okano; Nicholas A Isley; Dale L Boger
Journal:  Chem Rev       Date:  2017-04-24       Impact factor: 60.622

8.  Functional and biochemical analysis of a key series of ramoplanin analogues.

Authors:  Xiao Fang; Joonwoo Nam; Dongwoo Shin; Yosup Rew; Dale L Boger; Suzanne Walker
Journal:  Bioorg Med Chem Lett       Date:  2009-09-06       Impact factor: 2.823

9.  Alanine scan of [L-Dap(2)]ramoplanin A2 aglycon: assessment of the importance of each residue.

Authors:  Joonwoo Nam; Dongwoo Shin; Yosup Rew; Dale L Boger
Journal:  J Am Chem Soc       Date:  2007-06-26       Impact factor: 15.419

10.  The Difference a Single Atom Can Make: Synthesis and Design at the Chemistry-Biology Interface.

Authors:  Dale L Boger
Journal:  J Org Chem       Date:  2017-10-13       Impact factor: 4.354

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