Literature DB >> 15173380

DnaG interacts with a linker region that joins the N- and C-domains of DnaB and induces the formation of 3-fold symmetric rings.

Jenny Thirlway1, Ian J Turner, Christopher T Gibson, Laurence Gardiner, Kevin Brady, Stephanie Allen, Clive J Roberts, Panos Soultanas.   

Abstract

Loading of the replicative ring helicase onto the origin of replication (oriC) is the final outcome of a well coordinated series of events that collectively constitute a primosomal cascade. Once the ring helicase is loaded, it recruits the primase and signals the switch to the polymerization mode. The transient nature of the helicase-primase (DnaB-DnaG) interaction in the Escherichia coli system has hindered our efforts to elucidate its structure and function. Taking advantage of the stable DnaB-DnaG complex in Bacillus stearothermophilus, we have reviewed conflicting mutagenic data from other bacterial systems and shown that DnaG interacts with the flexible linker that connects the N- and C-terminal domains of DnaB. Furthermore, atomic force microscopy (AFM) imaging experiments show that binding of the primase to the helicase induces predominantly a 3-fold symmetric morphology to the hexameric ring. Overall, three DnaG molecules appear to interact with the hexameric ring helicase but a small number of complexes with two and even one DnaG molecule bound to DnaB were also detected. The structural/functional significance of these data is discussed and a speculative structural model for this complex is suggested.

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Year:  2004        PMID: 15173380      PMCID: PMC434434          DOI: 10.1093/nar/gkh628

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  45 in total

1.  Structure of the zinc-binding domain of Bacillus stearothermophilus DNA primase.

Authors:  H Pan; D B Wigley
Journal:  Structure       Date:  2000-03-15       Impact factor: 5.006

Review 2.  DNA helicases: 'inching forward'.

Authors:  P Soultanas; D B Wigley
Journal:  Curr Opin Struct Biol       Date:  2000-02       Impact factor: 6.809

3.  Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.

Authors:  M R Sawaya; S Guo; S Tabor; C C Richardson; T Ellenberger
Journal:  Cell       Date:  1999-10-15       Impact factor: 41.582

Review 4.  Helicase structure and mechanism.

Authors:  Jonathan M Caruthers; David B McKay
Journal:  Curr Opin Struct Biol       Date:  2002-02       Impact factor: 6.809

5.  High-efficiency transformation of yeast by electroporation.

Authors:  D M Becker; L Guarente
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

6.  The dnaB-dnaC replication protein complex of Escherichia coli. II. Role of the complex in mobilizing dnaB functions.

Authors:  E Wahle; R S Lasken; A Kornberg
Journal:  J Biol Chem       Date:  1989-02-15       Impact factor: 5.157

7.  Structure of the RNA polymerase domain of E. coli primase.

Authors:  J L Keck; D D Roche; A S Lynch; J M Berger
Journal:  Science       Date:  2000-03-31       Impact factor: 47.728

8.  Structure and function of Escherichia coli DnaB protein: role of the N-terminal domain in helicase activity.

Authors:  S B Biswas; P H Chen; E E Biswas
Journal:  Biochemistry       Date:  1994-09-20       Impact factor: 3.162

9.  Crystal structure of the replication terminator protein from B. subtilis at 2.6 A.

Authors:  D E Bussiere; D Bastia; S W White
Journal:  Cell       Date:  1995-02-24       Impact factor: 41.582

10.  Mapping protein-protein interactions within a stable complex of DNA primase and DnaB helicase from Bacillus stearothermophilus.

Authors:  L E Bird; H Pan; P Soultanas; D B Wigley
Journal:  Biochemistry       Date:  2000-01-11       Impact factor: 3.162

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  20 in total

1.  Twinkle, the mitochondrial replicative DNA helicase, is widespread in the eukaryotic radiation and may also be the mitochondrial DNA primase in most eukaryotes.

Authors:  Timothy E Shutt; Michael W Gray
Journal:  J Mol Evol       Date:  2006-04-11       Impact factor: 2.395

2.  Coumarin-based inhibitors of Bacillus anthracis and Staphylococcus aureus replicative DNA helicase: chemical optimization, biological evaluation, and antibacterial activities.

Authors:  Bing Li; Ramdas Pai; Ming Di; Daniel Aiello; Marjorie H Barnes; Michelle M Butler; Tommy F Tashjian; Norton P Peet; Terry L Bowlin; Donald T Moir
Journal:  J Med Chem       Date:  2012-12-11       Impact factor: 7.446

3.  DnaB helicase is recruited to the replication initiation complex via binding of DnaA domain I to the lateral surface of the DnaB N-terminal domain.

Authors:  Chihiro Hayashi; Erika Miyazaki; Shogo Ozaki; Yoshito Abe; Tsutomu Katayama
Journal:  J Biol Chem       Date:  2020-06-15       Impact factor: 5.157

4.  Conserved residues of the C-terminal p16 domain of primase are involved in modulating the activity of the bacterial primosome.

Authors:  Kiran Chintakayala; Marilynn A Larson; Mark A Griep; Steven H Hinrichs; Panos Soultanas
Journal:  Mol Microbiol       Date:  2008-04       Impact factor: 3.501

5.  DnaC, the indispensable companion of DnaB helicase, controls the accessibility of DnaB helicase by primase.

Authors:  Magdalena M Felczak; Sundari Chodavarapu; Jon M Kaguni
Journal:  J Biol Chem       Date:  2017-10-25       Impact factor: 5.157

6.  Allosteric regulation of the primase (DnaG) activity by the clamp-loader (tau) in vitro.

Authors:  Kiran Chintakayala; Cristina Machón; Anna Haroniti; Marilyn A Larson; Steven H Hinrichs; Mark A Griep; Panos Soultanas
Journal:  Mol Microbiol       Date:  2009-04       Impact factor: 3.501

7.  Discovery of antagonist peptides against bacterial helicase-primase interaction in B. stearothermophilus by reverse yeast three-hybrid.

Authors:  Laurence Gardiner; Barry J Coyle; Weng C Chan; Panos Soultanas
Journal:  Chem Biol       Date:  2005-05

Review 8.  The bacterial helicase-primase interaction: a common structural/functional module.

Authors:  Panos Soultanas
Journal:  Structure       Date:  2005-06       Impact factor: 5.006

9.  Solution structure of the helicase-interaction domain of the primase DnaG: a model for helicase activation.

Authors:  Karl Syson; Jenny Thirlway; Andrea M Hounslow; Panos Soultanas; Jonathan P Waltho
Journal:  Structure       Date:  2005-04       Impact factor: 5.006

10.  Domain swapping reveals that the C- and N-terminal domains of DnaG and DnaB, respectively, are functional homologues.

Authors:  Kiran Chintakayala; Marilynn A Larson; William H Grainger; David J Scott; Mark A Griep; Steven H Hinrichs; Panos Soultanas
Journal:  Mol Microbiol       Date:  2007-03       Impact factor: 3.501

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