Literature DB >> 15169539

Networks, dynamics, and modularity.

Evan A Variano1, Jonathan H McCoy, Hod Lipson.   

Abstract

The identification of general principles relating structure to dynamics has been a major goal in the study of complex networks. We propose that the special case of linear network dynamics provides a natural framework within which a number of interesting yet tractable problems can be defined. We report the emergence of modularity and hierarchical organization in evolved networks supporting asymptotically stable linear dynamics. Numerical experiments demonstrate that linear stability benefits from the presence of a hierarchy of modules and that this architecture improves the robustness of network stability to random perturbations in network structure. This work illustrates an approach to network science which is simultaneously structural and dynamical in nature.

Mesh:

Year:  2004        PMID: 15169539     DOI: 10.1103/PhysRevLett.92.188701

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  32 in total

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2.  Spontaneous evolution of modularity and network motifs.

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Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-20       Impact factor: 11.205

Review 3.  Theories and measures of consciousness: an extended framework.

Authors:  Anil K Seth; Eugene Izhikevich; George N Reeke; Gerald M Edelman
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4.  An information-theoretic framework for resolving community structure in complex networks.

Authors:  Martin Rosvall; Carl T Bergstrom
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-23       Impact factor: 11.205

5.  Stability and structural constraints of random brain networks with excitatory and inhibitory neural populations.

Authors:  Richard T Gray; Peter A Robinson
Journal:  J Comput Neurosci       Date:  2008-12-23       Impact factor: 1.621

6.  Trade-offs between efficiency and robustness in bacterial metabolic networks are associated with niche breadth.

Authors:  Melissa J Morine; Hong Gu; Ransom A Myers; Joseph P Bielawski
Journal:  J Mol Evol       Date:  2009-04-14       Impact factor: 2.395

Review 7.  Dual-phase evolution in complex adaptive systems.

Authors:  Greg Paperin; David G Green; Suzanne Sadedin
Journal:  J R Soc Interface       Date:  2011-01-19       Impact factor: 4.118

8.  Activating and inhibiting connections in biological network dynamics.

Authors:  Daniel McDonald; Laura Waterbury; Rob Knight; M D Betterton
Journal:  Biol Direct       Date:  2008-12-04       Impact factor: 4.540

9.  A big world inside small-world networks.

Authors:  Zhihua Zhang; Jianzhi Zhang
Journal:  PLoS One       Date:  2009-05-25       Impact factor: 3.240

10.  Extinctions in heterogeneous environments and the evolution of modularity.

Authors:  Nadav Kashtan; Merav Parter; Erez Dekel; Avi E Mayo; Uri Alon
Journal:  Evolution       Date:  2009-03-10       Impact factor: 3.694

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