Literature DB >> 15165857

Crystal structure of T state aspartate carbamoyltransferase of the hyperthermophilic archaeon Sulfolobus acidocaldarius.

Dirk De Vos1, Filip Van Petegem, Han Remaut, Christianne Legrain, Nicolas Glansdorff, Jozef J Van Beeumen.   

Abstract

Aspartate carbamoyltransferase (ATCase) is a model enzyme for understanding allosteric effects. The dodecameric complex exists in two main states (T and R) that differ substantially in their quaternary structure and their affinity for various ligands. Many hypotheses have resulted from the structure of the Escherichia coli ATCase, but so far other crystal structures to test these have been lacking. Here, we present the tertiary and quaternary structure of the T state ATCase of the hyperthermophilic archaeon Sulfolobus acidocaldarius (SaATC(T)), determined by X-ray crystallography to 2.6A resolution. The quaternary structure differs from the E.coli ATCase, by having altered interfaces between the catalytic (C) and regulatory (R) subunits, and the presence of a novel C1-R2 type interface. Conformational differences in the 240 s loop region of the C chain and the C-terminal region of the R chain affect intersubunit and interdomain interfaces implicated previously in the allosteric behavior of E.coli ATCase. The allosteric-zinc binding domain interface is strengthened at the expense of a weakened R1-C4 type interface. The increased hydrophobicity of the C1-R1 type interface may stabilize the quaternary structure. Catalytic trimers of the S.acidocaldarius ATCase are unstable due to a drastic weakening of the C1-C2 interface. The hyperthermophilic ATCase presents an interesting example of how an allosteric enzyme can adapt to higher temperatures. The structural rearrangement of this thermophilic ATCase may well promote its thermal stability at the expense of changes in the allosteric behavior.

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Year:  2004        PMID: 15165857     DOI: 10.1016/j.jmb.2004.03.079

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  6 in total

1.  Structure of the catalytic trimer of Methanococcus jannaschii aspartate transcarbamoylase in an orthorhombic crystal form.

Authors:  Jacqueline Vitali; Michael J Colaneri
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-08-20

2.  How grass keeps growing: an integrated analysis of hormonal crosstalk in the maize leaf growth zone.

Authors:  Dirk De Vos; Hilde Nelissen; Hamada AbdElgawad; Els Prinsen; Jan Broeckhove; Dirk Inzé; Gerrit T S Beemster
Journal:  New Phytol       Date:  2019-12-24       Impact factor: 10.151

3.  Structure of the catalytic chain of Methanococcus jannaschii aspartate transcarbamoylase in a hexagonal crystal form: insights into the path of carbamoyl phosphate to the active site of the enzyme.

Authors:  Jacqueline Vitali; Aditya K Singh; Alexei S Soares; Michael J Colaneri
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-04-20

4.  Expression, purification, crystallization and preliminary X-ray crystallographic studies of a cold-adapted aspartate carbamoyltransferase from Moritella profunda.

Authors:  Dirk De Vos; Paco Hulpiau; Bjorn Vergauwen; Savvas N Savvides; Jozef Van Beeumen
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-02-12

5.  Crystallization and preliminary X-ray analysis of aspartate transcarbamoylase from the parasitic protist Trypanosoma cruzi.

Authors:  Kazuaki Matoba; Takeshi Nara; Takashi Aoki; Teruki Honma; Akiko Tanaka; Masayuki Inoue; Shigeru Matsuoka; Daniel Ken Inaoka; Kiyoshi Kita; Shigeharu Harada
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-08-26

Review 6.  From Genome to Structure and Back Again: A Family Portrait of the Transcarbamylases.

Authors:  Dashuang Shi; Norma M Allewell; Mendel Tuchman
Journal:  Int J Mol Sci       Date:  2015-08-12       Impact factor: 5.923

  6 in total

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