Literature DB >> 15164160

Tests of linkage and/or association of TGF-beta1 and COL1A1 genes with bone mass.

Ji-Rong Long1, Peng-Yuan Liu, Yan Lu, Volodymyr Dvornyk, Dong-Hai Xiong, Lan-Juan Zhao, Hong-Wen Deng.   

Abstract

Transforming growth factor beta 1 (TGF-beta1) is involved in bone metabolism and collagen type I alpha 1 (COL1A1) is the most abundant protein of bone matrix. Both have been considered as candidate genes for osteoporosis. In this study, we employed the transmission disequilibrium test (TDT) to examine the relationship between each of the two genes with bone mineral density (BMD) and bone mineral content (BMC) at the spine and hip in a sample of 1668 subjects from 387 Caucasian nuclear families. For the TGF-beta1 gene, three SNPs, SNP1, SNP2, and SNP4 (located in exon 1, intron 4 and intron 5, respectively) were tested and the minor allele frequencies were 30.9%, 2.1% and 27.0%, respectively. All eight possible haplotypes (TGF1-8) were observed. For the COL1A1 gene, the minor allele frequencies of SNP5, SNP6 and SNP8 (located in exon 1, intron 1, and exon 45, respectively) were 15.2%, 18.7%, 2.0%, respectively, and only six of eight potential haplotypes (COL1-6) were obtained. In the whole sample, total associations were observed between haplotype COL5 with spine BMD (P=0.027), haplotypes COL3 and TGF4 with hip BMC (P=0.002, 0.003, respectively). Within-family associations were found for spine BMD at haplotypes TGF4 (P=0.027) in female offspring families and TGF3 (P=0.021) in male offspring families. Further studies with denser markers and larger sample size are required to eventually define the relationship between these two genes with bone mass at the spine and hip.

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Year:  2004        PMID: 15164160     DOI: 10.1007/s00198-004-1650-1

Source DB:  PubMed          Journal:  Osteoporos Int        ISSN: 0937-941X            Impact factor:   4.507


  39 in total

1.  A general test of association for quantitative traits in nuclear families.

Authors:  G R Abecasis; L R Cardon; W O Cookson
Journal:  Am J Hum Genet       Date:  2000-01       Impact factor: 11.025

2.  Characterization of perimenopausal bone loss: a prospective study.

Authors:  R Recker; J Lappe; K Davies; R Heaney
Journal:  J Bone Miner Res       Date:  2000-10       Impact factor: 6.741

3.  Genetic case-control association studies--correcting for multiple testing.

Authors:  D R Nyholt
Journal:  Hum Genet       Date:  2001-10-19       Impact factor: 4.132

4.  Evidence of association and linkage disequilibrium between a novel polymorphism in the transforming growth factor beta 1 gene and hip bone mineral density: a study of female twins.

Authors:  R W Keen; H Snieder; H Molloy; J Daniels; M Chiano; F Gibson; L Fairbairn; P Smith; A J MacGregor; D Gewert; T D Spector
Journal:  Rheumatology (Oxford)       Date:  2001-01       Impact factor: 7.580

5.  A whole-genome linkage scan suggests several genomic regions potentially containing quantitative trait Loci for osteoporosis.

Authors:  Hong-Wen Deng; Fu-Hua Xu; Qing-Yang Huang; Hui Shen; Hongyi Deng; Theresa Conway; Yong-Jun Liu; Yao-Zhong Liu; Jin-Long Li; Hai-Tao Zhang; K M Davies; Robert R Recker
Journal:  J Clin Endocrinol Metab       Date:  2002-11       Impact factor: 5.958

6.  Dental manifestations of osteogenesis imperfecta and abnormalities of collagen I metabolism.

Authors:  A M Lund; B L Jensen; L A Nielsen; F Skovby
Journal:  J Craniofac Genet Dev Biol       Date:  1998 Jan-Mar

7.  Association of CTR and COLIA1 alleles with BMD values in peri- and postmenopausal women.

Authors:  V Braga; M Mottes; S Mirandola; V Lisi; G Malerba; L Sartori; G Bianchi; D Gatti; M Rossini; D Bianchini; S Adami
Journal:  Calcif Tissue Int       Date:  2000-11       Impact factor: 4.333

8.  Polymorphisms in the transforming growth factor beta 1 gene and osteoporosis.

Authors:  Bente Lomholt Langdahl; Mette Carstens; Liselotte Stenkjaer; Erik Fink Eriksen
Journal:  Bone       Date:  2003-03       Impact factor: 4.398

9.  Genetic control of the circulating concentration of transforming growth factor type beta1.

Authors:  D J Grainger; K Heathcote; M Chiano; H Snieder; P R Kemp; J C Metcalfe; N D Carter; T D Spector
Journal:  Hum Mol Genet       Date:  1999-01       Impact factor: 6.150

10.  First-stage autosomal genome screen in extended pedigrees suggests genes predisposing to low bone mineral density on chromosomes 1p, 2p and 4q.

Authors:  M Devoto; K Shimoya; J Caminis; J Ott; A Tenenhouse; M P Whyte; L Sereda; S Hall; E Considine; C J Williams; G Tromp; H Kuivaniemi; L Ala-Kokko; D J Prockop; L D Spotila
Journal:  Eur J Hum Genet       Date:  1998 Mar-Apr       Impact factor: 4.246

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  4 in total

Review 1.  Molecular genetic studies of gene identification for osteoporosis: a 2004 update.

Authors:  Yong-Jun Liu; Hui Shen; Peng Xiao; Dong-Hai Xiong; Li-Hua Li; Robert R Recker; Hong-Wen Deng
Journal:  J Bone Miner Res       Date:  2006-10       Impact factor: 6.741

2.  Effects of COLIA1 polymorphisms and haplotypes on perimenopausal bone mass, postmenopausal bone loss and fracture risk.

Authors:  N González-Bofill; L B Husted; T Harsløf; C L Tofteng; B Abrahamsen; P Eiken; P Vestergaard; B L Langdahl
Journal:  Osteoporos Int       Date:  2010-06-23       Impact factor: 4.507

3.  A bivariate whole genome linkage study identified genomic regions influencing both BMD and bone structure.

Authors:  Xiao-Gang Liu; Yong-Jun Liu; Jianfeng Liu; Yufang Pei; Dong-Hai Xiong; Hui Shen; Hong-Yi Deng; Christopher J Papasian; Betty M Drees; James J Hamilton; Robert R Recker; Hong-Wen Deng
Journal:  J Bone Miner Res       Date:  2008-11       Impact factor: 6.741

Review 4.  Vertebral body integrity: a review of various anatomical factors involved in the lumbar region.

Authors:  L V Prabhu; V V Saralaya; M M Pai; A V Ranade; G Singh; S Madhyastha
Journal:  Osteoporos Int       Date:  2007-04-03       Impact factor: 5.071

  4 in total

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