| Literature DB >> 15162976 |
Yoshitaka Murakami1, Shuji Hashimoto, Kiyosu Taniguchi, Ken Osaka, Hiroshi Fuchigami, Masaki Nagai.
Abstract
BACKGROUND: Simple methods have been developed to warn of pre-epidemics and epidemics in small areas using data of infectious diseases surveillance. Epidemic warnings are made if the index of cases per week per sentinel medical institution is greater than a defined value. A pre-epidemic warning means that an epidemic warning will be given in the following four weeks. While the methods are used routinely for surveillance in Japan, they remain to be validated.Entities:
Mesh:
Year: 2004 PMID: 15162976 PMCID: PMC8660565 DOI: 10.2188/jea.14.33
Source DB: PubMed Journal: J Epidemiol ISSN: 0917-5040 Impact factor: 3.211
Critical values (cases per week per sentinel medical institution) for issuing (onset) and ending epidemic warnings, and issuing pre-epidemic warning in infectious disease surveillance in Japan.
| Diseases | Warning | Pre-epidemic | |
|
| |||
| onset | end | ||
| Influenza-like illness | 30 | 10 | 10 |
| Pharyngoconjunctival fever | 1 | 0.1 | — |
| Group A streptococcal pharyngitis | 4 | 2 | — |
| Infectious gastroenteritis | 20 | 12 | — |
| Chickenpox | 7 | 4 | 4 |
| Hand-foot-mouth disease | 5 | 2 | — |
| Erythema infectiosum | 2 | 1 | — |
| Exanthema subtium | 4 | 2 | — |
| Pertussis | 1 | 0.1 | — |
| Rubella | 3 | 1 | 1 |
| Herpangina | 6 | 2 | — |
| Measles | 1.5 | 0.5 | 0.5 |
| Mumps | 5 | 2 | 3 |
The numbers in the table are cases per week per sentinel medical institution.
Annual numbers of cases per sentinel medical institution in infectious disease surveillance in Japan, April 1999-March 2002, compared with range of those in 1993-1997.
| Annual numbers of cases per sentinel medical institution | |||||
|
| |||||
| Diseases | April 1999-March 2000 | April 2000-March 2001 | April 2001-March 2002 | Range(1993-1997) | |
|
| |||||
| minimum | maximum | ||||
| Influenza-like illness | 193.13 | 57.01 | 144.50 | 44.75 | 312.12 |
| Pharyngoconjunctival fever | 4.12 | 7.85 | 7.76 | 1.76 | 4.39 |
| Group A streptococcal pharyngitis | 43.81 | 57.60 | 50.82 | 24.71 | 34.88 |
| Infectious gastroenteritis | 294.63 | 299.58 | 287.90 | 192.51 | 498.41 |
| Chickenpox | 84.02 | 97.85 | 83.54 | 73.40 | 77.98 |
| Hand-foot-mouth disease | 18.68 | 70.25 | 41.10 | 10.07 | 65.35 |
| Erythema infectiosum | 8.64 | 14.31 | 23.09 | 5.29 | 22.74 |
| Exanthema subtium | 42.79 | 42.67 | 40.70 | 34.22 | 36.75 |
| Pertussis | 1.16 | 1.18 | 0.56 | 1.14 | 2.34 |
| Rubella | 1.24 | 1.05 | 0.89 | 6.70 | 61.20 |
| Herpangina | 53.80 | 49.12 | 47.06 | 29.98 | 39.60 |
| Measles | 3.40 | 9.42 | 9.28 | 6.50 | 14.30 |
| Mumps | 30.89 | 58.13 | 83.66 | 29.21 | 62.37 |
Data of fiscal years are used in 3 years from 1999 through 2001.
The proportion of weeks in which an epidemic warnings were issued in public health center areas in April 1999-March 2002, compared with range of those in 1993-1997.
| The proportion of epidemic warning weeks (%) | |||||
|
| |||||
| Diseases | April 1999-March 2000 | April 2000-March 2001 | April 2001-March 2002 | Range(1993-1997) | |
|
| |||||
| minimum | maximum | ||||
| Influenza-like illness | 3.3 | 0.5 | 5.5 | 0.7 | 10.9 |
| Pharyngoconjunctival fever | 3.2 | 6.4 | 7.3 | 1.8 | 5.0 |
| Group A streptococcal pharyngitis | 4.6 | 7.7 | 6.4 | 3.6 | 5.2 |
| Infectious gastroenteritis | 6.5 | 6.9 | 6.0 | 3.6 | 7.3 |
| Chickenpox | 2.8 | 4.3 | 2.7 | 4.1 | 4.7 |
| Hand-foot-mouth disease | 1.7 | 10.5 | 5.2 | 1.0 | 11.9 |
| Erythema infectiosum | 1.7 | 3.1 | 6.6 | 1.2 | 8.9 |
| Exanthema subtium | 0.7 | 0.5 | 0.3 | 1.8 | 2.7 |
| Pertussis | 0.3 | 0.4 | 0.1 | 0.8 | 2.1 |
| Rubella | 0.1 | 0.1 | 0.0 | 1.7 | 19.6 |
| Herpangina | 7.8 | 6.2 | 6.7 | 4.2 | 6.7 |
| Measles | 1.2 | 3.8 | 4.5 | 4.2 | 8.2 |
| Mumps | 2.0 | 5.9 | 11.2 | 3.4 | 9.5 |
Data of fiscal years are used in 3 years from 1999 through 2001.
The proportion of epidemic warning weeks: the number of epidemic warnings which were issued in all the public health center area during the fiscal year 1999-2001 divided by the number of weeks in all the public health center area (583 areas) during the fiscal year 1999-2001(157 weeks).
Median, the 25th and 75th percentile of weekly cases per sentinel medical institution before and after the issuing of an epidemic warning.
| Weekly cases per sentinel medical institution | |||||||||||
|
| |||||||||||
| Before warning onset | Onset | After warning onset | Non-warning | ||||||||
|
|
| ||||||||||
| 4weeks | 3weeks | 2weeks | 1week | 1week | 2weeks | 3weeks | 4weeks | ||||
| Influenza-like illness | median | 1.3 | 3.5 | 9.0 | 20.0 | 37.0 | 39.0 | 29.9 | 18.7 | 11.3 | 0.0 |
| 25th percentile | 0.3 | 1.2 | 5.2 | 14.6 | 32.5 | 28.2 | 20.3 | 11.9 | 5.8 | 0.0 | |
| 75th percentile | 4.0 | 7.4 | 14.9 | 25.0 | 44.2 | 52.5 | 44.9 | 30.0 | 18.9 | 0.3 | |
| number of observation | 596 | 596 | 596 | 596 | 596 | 595 | 594 | 586 | 579 | 84,353 | |
| Pharyngoconjunctival fever | median | 0.0 | 0.0 | 0.0 | 0.1 | 1.1 | 0.3 | 0.3 | 0.3 | 0.2 | 0.0 |
| 25th percentile | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
| 75th percentile | 0.2 | 0.3 | 0.3 | 0.5 | 1.5 | 1.0 | 0.8 | 0.8 | 0.6 | 0.0 | |
| number of observation | 955 | 955 | 955 | 955 | 955 | 949 | 946 | 942 | 939 | 80,050 | |
| Group A streptococcal pharyngitis | median | 1.3 | 1.5 | 1.9 | 2.0 | 4.5 | 2.8 | 2.3 | 2.3 | 2.0 | 0.4 |
| 25th percentile | 0.7 | 0.7 | 1.0 | 1.3 | 4.0 | 1.5 | 1.2 | 1.0 | 1.0 | 0.0 | |
| 75th percentile | 2.0 | 2.3 | 2.7 | 3.0 | 5.3 | 4.0 | 4.0 | 3.6 | 3.8 | 1.0 | |
| number of observation | 873 | 873 | 873 | 873 | 873 | 870 | 867 | 862 | 854 | 81,355 | |
| Infectious gastroenteritis | median | 6.3 | 8.1 | 11.1 | 15.0 | 23.0 | 21.7 | 18.5 | 14.6 | 12.3 | 2.7 |
| 25th percentile | 3.7 | 5.3 | 8.0 | 12.2 | 21.0 | 16.3 | 12.5 | 9.0 | 8.0 | 0.9 | |
| 75th percentile | 10.0 | 11.6 | 14.0 | 17.5 | 26.3 | 28.3 | 27.4 | 21.8 | 18.3 | 5.8 | |
| number of observation | 1,012 | 1,012 | 1,012 | 1,012 | 1,012 | 1,011 | 1,010 | 1,004 | 996 | 79,140 | |
| Chickenpox | median | 2.7 | 3.0 | 4.3 | 3.3 | 8.0 | 4.0 | 5.5 | 4.0 | 4.3 | 1.0 |
| 25th percentile | 1.5 | 1.5 | 3.0 | 2.0 | 7.3 | 2.7 | 3.6 | 2.3 | 2.5 | 0.3 | |
| 75th percentile | 4.0 | 4.4 | 5.5 | 4.8 | 9.0 | 5.8 | 8.0 | 5.8 | 6.5 | 2.0 | |
| number of observation | 628 | 628 | 628 | 628 | 628 | 624 | 620 | 617 | 613 | 84,541 | |
| Hand-foot-mouth disease | median | 0.8 | 1.3 | 2.0 | 3.0 | 6.0 | 6.1 | 6.1 | 5.3 | 4.5 | 0.0 |
| 25th percentile | 0.2 | 0.5 | 1.0 | 2.0 | 5.3 | 3.7 | 3.0 | 2.3 | 2.0 | 0.0 | |
| 75th percentile | 1.7 | 2.1 | 3.0 | 4.0 | 7.5 | 8.6 | 10.2 | 10.4 | 10.0 | 0.4 | |
| number of observation | 743 | 743 | 743 | 743 | 743 | 743 | 743 | 742 | 741 | 80,735 | |
| Erythema infectiosum | median | 0.5 | 0.5 | 0.7 | 0.8 | 2.3 | 1.1 | 1.0 | 1.0 | 0.8 | 0.0 |
| 25th percentile | 0.0 | 0.0 | 0.2 | 0.3 | 2.0 | 0.5 | 0.4 | 0.3 | 0.3 | 0.0 | |
| 75th percentile | 1.0 | 1.0 | 1.1 | 1.3 | 2.7 | 2.0 | 2.0 | 1.8 | 1.6 | 0.3 | |
| number of observation | 611 | 611 | 611 | 611 | 611 | 609 | 604 | 598 | 593 | 84,750 | |
| Exanthema subtium | median | 1.3 | 1.3 | 1.3 | 1.3 | 4.3 | 2.0 | 2.0 | 1.8 | 1.7 | 0.6 |
| 25th percentile | 0.9 | 1.0 | 0.7 | 1.0 | 4.0 | 1.0 | 1.0 | 1.0 | 0.8 | 0.3 | |
| 75th percentile | 2.3 | 2.0 | 2.0 | 2.5 | 5.0 | 3.0 | 2.7 | 3.0 | 2.7 | 1.0 | |
| number of observation | 133 | 133 | 133 | 133 | 133 | 132 | 131 | 131 | 131 | 90,158 | |
| Pertussis | median | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| 25th percentile | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
| 75th percentile | 0.0 | 0.0 | 0.0 | 0.0 | 1.3 | 0.2 | 0.0 | 0.0 | 0.0 | 0.0 | |
| number of observation | 134 | 134 | 134 | 134 | 134 | 133 | 133 | 133 | 133 | 90,271 | |
| Rubella | median | 0.0 | 0.0 | 0.0 | 0.0 | 3.5 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| 25th percentile | 0.0 | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
| 75th percentile | 0.3 | 0.8 | 0.3 | 0.7 | 5.0 | 2.0 | 2.0 | 1.0 | 0.0 | 0.0 | |
| number of observation | 11 | 11 | 11 | 11 | 11 | 11 | 11 | 11 | 11 | 91,409 | |
| Herpangina | median | 0.5 | 1.0 | 2.2 | 3.8 | 7.5 | 8.0 | 7.8 | 6.0 | 4.3 | 0.0 |
| 25th percentile | 0.1 | 0.5 | 1.0 | 2.5 | 6.5 | 5.6 | 4.6 | 3.3 | 2.2 | 0.0 | |
| 75th percentile | 1.3 | 2.0 | 3.3 | 4.9 | 9.2 | 11.3 | 12.0 | 10.5 | 7.7 | 0.3 | |
| number of observation | 972 | 972 | 972 | 972 | 972 | 972 | 972 | 972 | 972 | 77,651 | |
| Measles | median | 0.1 | 0.2 | 0.4 | 0.4 | 1.9 | 0.8 | 0.8 | 0.6 | 0.6 | 0.0 |
| 25th percentile | 0.0 | 0.0 | 0.0 | 0.0 | 1.6 | 0.1 | 0.0 | 0.0 | 0.0 | 0.0 | |
| 75th percentile | 0.5 | 0.5 | 0.8 | 0.8 | 2.3 | 1.4 | 1.6 | 1.5 | 1.3 | 0.0 | |
| number of observation | 449 | 449 | 449 | 449 | 449 | 444 | 442 | 442 | 440 | 85,802 | |
| Mumps | median | 1.5 | 2.5 | 2.7 | 2.5 | 5.7 | 3.0 | 3.7 | 4.0 | 3.0 | 0.5 |
| 25th percentile | 1.0 | 1.7 | 1.7 | 1.5 | 5.3 | 2.0 | 2.5 | 2.5 | 1.8 | 0.0 | |
| 75th percentile | 2.7 | 3.5 | 3.6 | 3.4 | 6.5 | 4.5 | 5.0 | 5.7 | 4.8 | 1.0 | |
| number of observation | 504 | 504 | 504 | 504 | 504 | 495 | 487 | 480 | 475 | 83,647 | |
The data are expressed as median, the 25th and 75th percentile of cases per week per sentinel medical institution.
The number of observations represents the total number of weeks in which indices fall into the various categories.
The period from the beginning of week in April 1999 till the end of week in March 2002 are used for the analysis.
The proportions of weeks in which an pre-epidemic warnings were issued in public health center areas from April 1999 through March 2002, compared with the range of those in 1993-1997.
| The proportion of pre-epidemic warning weeks (%) | |||||
|
| |||||
| Diseases | April 1999-March 2000 | April 2000-March 2001 | April 2001-March 2002 | Range(1993-1997) | |
|
| |||||
| minimum | maximum | ||||
| Influenza-like illness | 5.7 | 2.7 | 4.6 | 1.9 | 4.5 |
| Chickenpox | 6.0 | 7.4 | 5.8 | 6.2 | 6.9 |
| Rubella | 0.4 | 0.2 | 0.2 | 3.4 | 9.5 |
| Measles | 2.3 | 6.2 | 5.8 | 5.2 | 8.2 |
| Mumps | 1.9 | 4.0 | 6.0 | 2.1 | 4.7 |
Data of fiscal years are used in 3 years from 1999 through 2001.
The proportion of pre-epidemic warning weeks: the number of pre-epidemic warnings which were issued in all the public health center area during the fiscal year 1999-2001 divided by the number of weeks in all the public health center area (583 areas) during the fiscal year 1999-2001(157 weeks).
Median, the 25th and 75th percentile of weekly cases per sentinel medical institution before and after the issuing of a pre-epidemic warning.
| Weekly cases per sentinel medical institution | |||||||||||
|
| |||||||||||
| Onset | Other | ||||||||||
|
|
| ||||||||||
| 4weeks | 3weeks | 2weeks | 1week | 1week | 2weeks | 3weeks | 4weeks | ||||
| Influenza-like illness | median | 0.5 | 1.1 | 2.8 | 6.3 | 13.6 | 19.0 | 20.7 | 18.0 | 12.7 | 0.0 |
| 25th percentile | 0.0 | 0.3 | 1.3 | 4.3 | 11.5 | 12.6 | 12.3 | 8.9 | 5.9 | 0.0 | |
| 75th percentile | 1.4 | 2.6 | 4.8 | 8.2 | 17.1 | 27.4 | 32.5 | 30.0 | 23.0 | 0.1 | |
| number of observation | 1,333 | 1,333 | 1,333 | 1,333 | 1,333 | 1,332 | 1,325 | 1,317 | 1,308 | 79,626 | |
| Chickenpox | median | 2.0 | 2.0 | 2.5 | 2.0 | 4.5 | 2.7 | 3.4 | 2.7 | 2.9 | 0.9 |
| 25th percentile | 1.0 | 1.0 | 1.7 | 1.3 | 4.1 | 1.7 | 2.3 | 1.7 | 1.8 | 0.3 | |
| 75th percentile | 3.0 | 3.0 | 3.3 | 3.0 | 5.1 | 3.8 | 4.9 | 4.0 | 4.3 | 1.8 | |
| number of observation | 2,239 | 2,239 | 2,239 | 2,239 | 2,239 | 2,220 | 2,205 | 2,191 | 2,184 | 72,190 | |
| Rubella | median | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| 25th percentile | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
| 75th percentile | 0.0 | 0.0 | 0.0 | 0.0 | 1.5 | 0.3 | 0.2 | 0.0 | 0.0 | 0.0 | |
| number of observation | 154 | 154 | 154 | 154 | 154 | 151 | 150 | 149 | 148 | 90,185 | |
| Measles | median | 0.0 | 0.0 | 0.0 | 0.0 | 0.6 | 0.2 | 0.2 | 0.0 | 0.0 | 0.0 |
| 25th percentile | 0.0 | 0.0 | 0.0 | 0.0 | 0.5 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | |
| 75th percentile | 0.2 | 0.2 | 0.3 | 0.2 | 0.8 | 0.5 | 0.5 | 0.4 | 0.5 | 0.0 | |
| number of observation | 1,818 | 1,818 | 1,818 | 1,818 | 1,818 | 1,803 | 1,787 | 1,779 | 1,772 | 75,926 | |
| Mumps | median | 1.5 | 1.7 | 1.7 | 1.5 | 3.3 | 2.0 | 2.0 | 2.3 | 2.0 | 0.4 |
| 25th percentile | 0.8 | 1.0 | 1.0 | 1.0 | 3.0 | 1.1 | 1.3 | 1.5 | 1.0 | 0.0 | |
| 75th percentile | 2.1 | 2.3 | 2.3 | 2.0 | 3.8 | 2.8 | 3.0 | 3.3 | 3.0 | 1.0 | |
| number of observation | 1,444 | 1,444 | 1,444 | 1,444 | 1,444 | 1,435 | 1,421 | 1,408 | 1,395 | 79,159 | |
The data are expressed as median, the 25th and 75th percentile of cases per week per sentinel medical institution.
The number of observations represents the total number of weeks in which indices fall into the various categories.
The period from the beginning of week in April 1999 till the end of week in March 2002 are used for the analysis.
*Other weeks: weeks that exclude the week of onset and before and after the onset of a pre-epidemic warning.
The sensitivity, specificity, and positive predictive values of an pre-epidemic warning in infectious disease surveillance in Japan, April 1999-March 2002.
| Sensitivity | Specificity | Positive | |
| Influenza-like illness | 90.4 | 93.7 | 23.9 |
| Chickenpox | 54.2 | 86.1 | 17.7 |
| Rubella | 36.4 | 99.2 | 2.5 |
| Measles | 43.7 | 89.3 | 16.3 |
| Mumps | 25.1 | 91.7 | 20.8 |
The numbers in the table are expressed as percentage (%)
The above result is based on the analysis of all the weekly cases per sentinel medical institution in the public health center areas (583 areas), from the beginning of week in April 1999 till the end of week in March 2002 (157 weeks).
The sensitivity is the proportion of valid pre-warnings, in the 4 weeks before the onset of an epidemic warning.
The specificity is the proportion of weeks without a pre-epidemic warning relative to the total number of weeks, in which there was no epidemic warning nor the 4 weeks before and after epidemic warning.
The positive predictive value is the proportion of valid pre-epidemic warnings relative to the total of pre-epidemic warnings.