Literature DB >> 15159593

Three-dimensional structural characterization of a novel Drosophila melanogaster acylphosphatase.

Simone Zuccotti1, Camillo Rosano, Matteo Ramazzotti, Donatella Degl'Innocenti, Massimo Stefani, Giampaolo Manao, Martino Bolognesi.   

Abstract

Analysis of the Drosophila melanogaster EST database led to the discovery and cloning of a novel acylphosphatase. The CG18505 gene coding for a new enzyme (AcPDro2) is clearly distinct from the previously described CG16870Acyp gene, which also codes for a D. melanogaster acylphosphatase (AcPDro). The putative catalytic residues, together with residues held to stabilize the acylphosphatase fold, are conserved in the two encoded proteins. Crystals of AcPDro2, which belong to the trigonal space group P3(1)21, with unit-cell parameters a = b = 45.8, c = 98.6 angstroms, gamma = 120 degrees, allowed the solution of the protein structure by molecular replacement and its refinement to 1.5 angstroms resolution. The AcPDro2 active-site structure is discussed. Copyright 2004 International Union of Crystallography

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Year:  2004        PMID: 15159593     DOI: 10.1107/S0907444904006808

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  7 in total

1.  Amyloid formation of a protein in the absence of initial unfolding and destabilization of the native state.

Authors:  Gemma Soldi; Francesco Bemporad; Silvia Torrassa; Annalisa Relini; Matteo Ramazzotti; Niccolò Taddei; Fabrizio Chiti
Journal:  Biophys J       Date:  2005-09-16       Impact factor: 4.033

2.  Biological function in a non-native partially folded state of a protein.

Authors:  Francesco Bemporad; Joerg Gsponer; Harri I Hopearuoho; Georgia Plakoutsi; Gianmarco Stati; Massimo Stefani; Niccolò Taddei; Michele Vendruscolo; Fabrizio Chiti
Journal:  EMBO J       Date:  2008-05-01       Impact factor: 11.598

3.  Preliminary characterization of two different crystal forms of acylphosphatase from the hyperthermophile archaeon Sulfolobus solfataricus.

Authors:  Simone Zuccotti; Camillo Rosano; Francesco Bemporad; Massimo Stefani; Martino Bolognesi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2004-12-24

4.  Mechanical unfolding of acylphosphatase studied by single-molecule force spectroscopy and MD simulations.

Authors:  Gali Arad-Haase; Silvia G Chuartzman; Shlomi Dagan; Reinat Nevo; Maksim Kouza; Binh Khanh Mai; Hung Tien Nguyen; Mai Suan Li; Ziv Reich
Journal:  Biophys J       Date:  2010-07-07       Impact factor: 4.033

5.  Crystallization and preliminary crystallographic analysis of human common-type acylphosphatase.

Authors:  Rachel C Y Yeung; Sonia Y Lam; Kam-Bo Wong
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-12-23

6.  Experimental free energy surfaces reveal the mechanisms of maintenance of protein solubility.

Authors:  Alfonso De Simone; Anne Dhulesia; Gemma Soldi; Michele Vendruscolo; Shang-Te Danny Hsu; Fabrizio Chiti; Christopher M Dobson
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-12       Impact factor: 11.205

7.  A rigidifying salt-bridge favors the activity of thermophilic enzyme at high temperatures at the expense of low-temperature activity.

Authors:  Sonia Y Lam; Rachel C Y Yeung; Tsz-Ha Yu; Kong-Hung Sze; Kam-Bo Wong
Journal:  PLoS Biol       Date:  2011-03-15       Impact factor: 8.029

  7 in total

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