Literature DB >> 15157073

Effect of drastic sequence alteration and D-amino acid incorporation on the membrane binding behavior of lytic peptides.

Niv Papo1, Yechiel Shai.   

Abstract

The amphipathic alpha-helix is a common motif found in many cell lytic peptides including antimicrobial peptides. We have recently shown that significantly altering the amphipathic structure of a lytic peptide by reshuffling its sequence and/or replacing a few l-amino acids with their D-enantiomers did not significantly affect the antimicrobial activity of the peptides nor their ability to bind and permeate negatively charged (PE/PG) membranes. However, a pronounced effect was observed regarding their hemolytic activity and their ability to bind and permeate zwitterionic (PC/Cho) membranes. To shed light on these findings, here we used surface plasmon resonance (SPR) with mono- and bilayer membranes. We found that the L-amino acid (aa) peptides bound 10-25-fold stronger to PC/Cho bilayers compared with monolayers, whereas the diastereomers bound similarly to both membranes. A two-state reaction model analysis of the data indicated that this difference is due to the insertion of the L-aa peptides into the PC/Cho bilayers, whereas the diastereomers are surface-localized. In contrast, only an approximately 2-fold difference was found with negatively charged membranes. Changes in the amphipathicity markedly affected only the insertion of the L-aa peptides into PC/Cho bilayers. Furthermore, whereas the all-L-aa peptides bound similarly to the PC/Cho and PE/PG membranes, the diastereomers bound approximately 100-fold better to PE/PG compared with PC/Cho membranes, and selectivity was determined only in the first binding step. The effect of the peptides on the lipid order determined by using ATR-FTIR studies supported these findings. Besides shedding light on the mode of action of these peptides, the present study demonstrates SPR as a powerful tool to differentiate between non-cell-selective compared with bacteria-selective peptides, based on differences in their membrane binding behavior.

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Year:  2004        PMID: 15157073     DOI: 10.1021/bi049944h

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  25 in total

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2.  Utilizing ESEEM spectroscopy to locate the position of specific regions of membrane-active peptides within model membranes.

Authors:  Raanan Carmieli; Niv Papo; Herbert Zimmermann; Alexey Potapov; Yechiel Shai; Daniella Goldfarb
Journal:  Biophys J       Date:  2005-10-28       Impact factor: 4.033

3.  Rational combinatorial design of pore-forming beta-sheet peptides.

Authors:  Joshua M Rausch; Jessica R Marks; William C Wimley
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-14       Impact factor: 11.205

4.  Antibacterial activity of ultrashort cationic lipo-beta-peptides.

Authors:  Griselda N Serrano; George G Zhanel; Frank Schweizer
Journal:  Antimicrob Agents Chemother       Date:  2009-02-23       Impact factor: 5.191

5.  Anti-human immunodeficiency virus type 1 activities of antimicrobial peptides derived from human and bovine cathelicidins.

Authors:  Guangshun Wang; Karen M Watson; Robert W Buckheit
Journal:  Antimicrob Agents Chemother       Date:  2008-06-30       Impact factor: 5.191

6.  Nylon-3 polymers active against drug-resistant Candida albicans biofilms.

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Journal:  J Am Chem Soc       Date:  2015-02-04       Impact factor: 15.419

7.  Antimicrobial peptide protegrin-3 adopt an antiparallel dimer in the presence of DPC micelles: a high-resolution NMR study.

Authors:  K S Usachev; S V Efimov; O A Kolosova; E A Klochkova; A V Aganov; V V Klochkov
Journal:  J Biomol NMR       Date:  2015-03-19       Impact factor: 2.835

8.  Broad-spectrum antimicrobial peptides by rational combinatorial design and high-throughput screening: the importance of interfacial activity.

Authors:  Ramesh Rathinakumar; William F Walkenhorst; William C Wimley
Journal:  J Am Chem Soc       Date:  2009-06-10       Impact factor: 15.419

9.  Bioactive and structural metabolites of pseudomonas and burkholderia species causal agents of cultivated mushrooms diseases.

Authors:  Anna Andolfi; Alessio Cimmino; Pietro Lo Cantore; Nicola Sante Iacobellis; Antonio Evidente
Journal:  Perspect Medicin Chem       Date:  2008-05-09

10.  Regulation of PutA-membrane associations by flavin adenine dinucleotide reduction.

Authors:  Weimin Zhang; Yuzhen Zhou; Donald F Becker
Journal:  Biochemistry       Date:  2004-10-19       Impact factor: 3.162

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