Literature DB >> 15156357

Activation tagging in plants: a tool for gene discovery.

Helen Tani1, Xinwei Chen, Pedro Nurmberg, John J Grant, Marjorie SantaMaria, Andrea Chini, Eleanor Gilroy, Paul R J Birch, Gary J Loake.   

Abstract

A significant limitation of classical loss-of-function screens designed to dissect genetic pathways is that they rarely uncover genes that function redundantly, are compensated by alternative metabolic or regulatory circuits, or which have an additional role in early embryo or gametophyte development. Activation T-DNA tagging is one approach that has emerged in plants to help circumvent these potential problems. This technique utilises a T-DNA sequence that contains four tandem copies of the cauliflower mosaic virus (CaMV) 35S enhancer sequence. This element enhances the expression of neighbouring genes either side of the randomly integrated T-DNA tag, resulting in gain-of-function phenotypes. Activation tagging has identified a number of genes fundamental to plant development, metabolism and disease resistance in Arabidopsis. This review provides selected examples of these discoveries to highlight the utility of this technology. The recent development of activation tagging strategies for other model plant systems and the construction of new more sophisticated vectors for the generation of conditional alleles are also discussed. These recent advances have significantly expanded the horizons for gain-of-function genetics in plants.

Entities:  

Mesh:

Year:  2004        PMID: 15156357     DOI: 10.1007/s10142-004-0112-3

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  64 in total

1.  Heat-shock tagging: a simple method for expression and isolation of plant genome DNA flanked by T-DNA insertions.

Authors:  S Matsuhara; F Jingu; T Takahashi; Y Komeda
Journal:  Plant J       Date:  2000-04       Impact factor: 6.417

2.  BRS1, a serine carboxypeptidase, regulates BRI1 signaling in Arabidopsis thaliana.

Authors:  J Li; K A Lease; F E Tax; J C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-24       Impact factor: 11.205

3.  Excision of the maize transposable element Ac in periclinal chimeric leaves of 35S-Ac-rolC transgenic aspen-Populus.

Authors:  M Fladung; M R Ahuja
Journal:  Plant Mol Biol       Date:  1997-04       Impact factor: 4.076

4.  Mutants of downy mildew resistance in Lactuca sativa (lettuce).

Authors:  P A Okubara; P A Anderson; O E Ochoa; R W Michelmore
Journal:  Genetics       Date:  1994-07       Impact factor: 4.562

5.  Salicylic acid potentiates an agonist-dependent gain control that amplifies pathogen signals in the activation of defense mechanisms.

Authors:  K Shirasu; H Nakajima; V K Rajasekhar; R A Dixon; C Lamb
Journal:  Plant Cell       Date:  1997-02       Impact factor: 11.277

6.  RIN4 interacts with Pseudomonas syringae type III effector molecules and is required for RPM1-mediated resistance in Arabidopsis.

Authors:  David Mackey; Ben F Holt; Aaron Wiig; Jeffery L Dangl
Journal:  Cell       Date:  2002-03-22       Impact factor: 41.582

7.  Characterization of a salicylic acid-insensitive mutant (sai1) of Arabidopsis thaliana, identified in a selective screen utilizing the SA-inducible expression of the tms2 gene.

Authors:  J Shah; F Tsui; D F Klessig
Journal:  Mol Plant Microbe Interact       Date:  1997-01       Impact factor: 4.171

8.  Activation tagging in Arabidopsis.

Authors:  D Weigel; J H Ahn; M A Blázquez; J O Borevitz; S K Christensen; C Fankhauser; C Ferrándiz; I Kardailsky; E J Malancharuvil; M M Neff; J T Nguyen; S Sato; Z Y Wang; Y Xia; R A Dixon; M J Harrison; C J Lamb; M F Yanofsky; J Chory
Journal:  Plant Physiol       Date:  2000-04       Impact factor: 8.340

9.  A disease resistance gene in Arabidopsis with specificity for two different pathogen avirulence genes.

Authors:  S R Bisgrove; M T Simonich; N M Smith; A Sattler; R W Innes
Journal:  Plant Cell       Date:  1994-07       Impact factor: 11.277

10.  The CaMV 35S enhancer contains at least two domains which can confer different developmental and tissue-specific expression patterns.

Authors:  P N Benfey; L Ren; N H Chua
Journal:  EMBO J       Date:  1989-08       Impact factor: 11.598

View more
  21 in total

1.  Application of T-DNA activation tagging to identify glutamate receptor-like genes that enhance drought tolerance in plants.

Authors:  Guihua Lu; Xiping Wang; Junhua Liu; Kun Yu; Yang Gao; Haiyan Liu; Changgui Wang; Wei Wang; Guokui Wang; Min Liu; Guanfan Mao; Binfeng Li; Jianying Qin; Mian Xia; Junli Zhou; Jingmei Liu; Shuqin Jiang; Hua Mo; Jinteng Cui; Nobuhiro Nagasawa; Shoba Sivasankar; Marc C Albertsen; Hajime Sakai; Barbara J Mazur; Michael W Lassner; Richard M Broglie
Journal:  Plant Cell Rep       Date:  2014-03-29       Impact factor: 4.570

2.  POLYGALACTURONASE INVOLVED IN EXPANSION1 functions in cell elongation and flower development in Arabidopsis.

Authors:  Chaowen Xiao; Chris Somerville; Charles T Anderson
Journal:  Plant Cell       Date:  2014-03-28       Impact factor: 11.277

3.  Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice.

Authors:  Masaki Mori; Chikako Tomita; Kazuhiko Sugimoto; Morifumi Hasegawa; Nagao Hayashi; Joseph G Dubouzet; Hirokazu Ochiai; Hitoshi Sekimoto; Hirohiko Hirochika; Shoshi Kikuchi
Journal:  Plant Mol Biol       Date:  2007-02-02       Impact factor: 4.076

4.  Arabidopsis Qc-SNARE gene AtSFT12 is involved in salt and osmotic stress responses and Na(+) accumulation in vacuoles.

Authors:  Vaishali N Tarte; Hye-Yeon Seok; Dong-Hyuk Woo; Dinh Huan Le; Huong T Tran; Ji-Won Baik; In Soon Kang; Sun-Young Lee; Taijoon Chung; Yong-Hwan Moon
Journal:  Plant Cell Rep       Date:  2015-02-18       Impact factor: 4.570

5.  The Arabidopsis chloroplast protein S-RBP11 is involved in oxidative and salt stress responses.

Authors:  Sun-Young Lee; Hye-Yeon Seok; Vaishali N Tarte; Dong-Hyuk Woo; Dihn Huan Le; Eun-Hye Lee; Yong-Hwan Moon
Journal:  Plant Cell Rep       Date:  2014-01-11       Impact factor: 4.570

6.  Hairy root-activation tagging: a high-throughput system for activation tagging in transformed hairy roots.

Authors:  Hikaru Seki; Tomoko Nishizawa; Nobukazu Tanaka; Yasuo Niwa; Shigeo Yoshida; Toshiya Muranaka
Journal:  Plant Mol Biol       Date:  2005-11       Impact factor: 4.076

7.  Actin is bundled in activation-tagged tobacco mutants that tolerate aluminum.

Authors:  Abdul Ahad; Peter Nick
Journal:  Planta       Date:  2006-08-15       Impact factor: 4.116

8.  Potato virus X-induced gene silencing in leaves and tubers of potato.

Authors:  Odile Faivre-Rampant; Eleanor M Gilroy; Katarina Hrubikova; Ingo Hein; Steve Millam; Gary J Loake; Paul Birch; Mark Taylor; Christophe Lacomme
Journal:  Plant Physiol       Date:  2004-04       Impact factor: 8.340

Review 9.  Phenome analysis in plant species using loss-of-function and gain-of-function mutants.

Authors:  Takashi Kuromori; Shinya Takahashi; Youichi Kondou; Kazuo Shinozaki; Minami Matsui
Journal:  Plant Cell Physiol       Date:  2009-06-05       Impact factor: 4.927

10.  Gain-of-function mutagenesis through activation tagging identifies XPB2 and SEN1 helicase genes as potential targets for drought stress tolerance in rice.

Authors:  Mouboni Dutta; Mazahar Moin; Anusree Saha; Dibyendu Dutta; Achala Bakshi; P B Kirti
Journal:  Theor Appl Genet       Date:  2021-04-05       Impact factor: 5.699

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.