Literature DB >> 16270231

Hairy root-activation tagging: a high-throughput system for activation tagging in transformed hairy roots.

Hikaru Seki1, Tomoko Nishizawa, Nobukazu Tanaka, Yasuo Niwa, Shigeo Yoshida, Toshiya Muranaka.   

Abstract

Activation tagging is a powerful technique for generating gain-of-function mutants in plants. We developed a new vector system for activation tagging of genes in "transformed hairy roots". The binary vector pHR-AT (Hairy Root-Activation Tagging) and its derivative pHR-AT-GFP contain a cluster of rol (rooting locus) genes together with the right border facing four tandem repeats of the cauliflower mosaic virus (CaMV) 35S enhancer element on the same T-DNA. Transformation experiments using Arabidopsis, potato, and tobacco as model plants revealed that upon inoculating plants with Agrobacterium tumefaciens harboring these vectors, a large number of independently transformed roots could be induced from explants within a short period of time, and root culture lines were subsequently established. Molecular analyses of the pHR-AT-GFP-transformed Arabidopsis lines showed that expression of the genes adjacent to the T-DNA insertion site was significantly increased. This system may facilitate application of the activation-tagging approach to plant species that are recalcitrant to the regeneration of transgenic plants. High-throughput metabolic profiling of activation-tagged root culture lines will offer opportunities for identifying regulatory or biosynthetic genes for the production of valuable secondary metabolites of interest.

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Year:  2005        PMID: 16270231     DOI: 10.1007/s11103-005-1008-x

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  35 in total

1.  Screening of transgenic plants by amplification of unknown genomic DNA flanking T-DNA.

Authors:  D Spertini; C Béliveau; G Bellemare
Journal:  Biotechniques       Date:  1999-08       Impact factor: 1.993

Review 2.  Plant 'hairy root' culture.

Authors:  J V Shanks; J Morgan
Journal:  Curr Opin Biotechnol       Date:  1999-04       Impact factor: 9.740

Review 3.  Large-scale production of hairy root.

Authors:  Nobuyuki Uozumi
Journal:  Adv Biochem Eng Biotechnol       Date:  2004       Impact factor: 2.635

4.  Efficient transformation of Arabidopsis thaliana: comparison of the efficiencies with various organs, plant ecotypes and Agrobacterium strains.

Authors:  K Akama; H Shiraishi; S Ohta; K Nakamura; K Okada; Y Shimura
Journal:  Plant Cell Rep       Date:  1992-12       Impact factor: 4.570

5.  The FLF MADS box gene: a repressor of flowering in Arabidopsis regulated by vernalization and methylation.

Authors:  C C Sheldon; J E Burn; P P Perez; J Metzger; J A Edwards; W J Peacock; E S Dennis
Journal:  Plant Cell       Date:  1999-03       Impact factor: 11.277

6.  Activation tagging in Arabidopsis.

Authors:  D Weigel; J H Ahn; M A Blázquez; J O Borevitz; S K Christensen; C Fankhauser; C Ferrándiz; I Kardailsky; E J Malancharuvil; M M Neff; J T Nguyen; S Sato; Z Y Wang; Y Xia; R A Dixon; M J Harrison; C J Lamb; M F Yanofsky; J Chory
Journal:  Plant Physiol       Date:  2000-04       Impact factor: 8.340

7.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

8.  Selection of high ginsenoside producing ginseng hairy root lines using targeted metabolic analysis.

Authors:  Sung-Sick Woo; Ji-Sook Song; Ju-Yeon Lee; Dong Su In; Hwa-Jee Chung; Jang Ryol Liu; Dong-Woog Choi
Journal:  Phytochemistry       Date:  2004-10       Impact factor: 4.072

9.  A disarmed binary vector from Agrobacterium tumefaciens functions in Agrobacterium rhizogenes : Frequent co-transformation of two distinct T-DNAs.

Authors:  R B Simpson; A Spielmann; L Margossian; T D McKnight
Journal:  Plant Mol Biol       Date:  1986-11       Impact factor: 4.076

10.  The CaMV 35S enhancer contains at least two domains which can confer different developmental and tissue-specific expression patterns.

Authors:  P N Benfey; L Ren; N H Chua
Journal:  EMBO J       Date:  1989-08       Impact factor: 11.598

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  4 in total

Review 1.  Hairy root biotechnology--indicative timeline to understand missing links and future outlook.

Authors:  Shakti Mehrotra; Vikas Srivastava; Laiq Ur Rahman; A K Kukreja
Journal:  Protoplasma       Date:  2015-01-28       Impact factor: 3.356

2.  Echium acanthocarpum hairy root cultures, a suitable system for polyunsaturated fatty acid studies and production.

Authors:  Elena Cequier-Sánchez; Covadonga Rodríguez; Roberto Dorta-Guerra; Angel G Ravelo; Rafael Zárate
Journal:  BMC Biotechnol       Date:  2011-04-27       Impact factor: 2.563

3.  Activation-tagging in indica rice identifies a novel transcription factor subunit, NF-YC13 associated with salt tolerance.

Authors:  P Manimaran; S Venkata Reddy; Mazahar Moin; M Raghurami Reddy; Poli Yugandhar; S S Mohanraj; S M Balachandran; P B Kirti
Journal:  Sci Rep       Date:  2017-08-24       Impact factor: 4.379

4.  Anthocyanin, a novel and user-friendly reporter for convenient, non-destructive, low cost, directly visual selection of transgenic hairy roots in the study of rhizobia-legume symbiosis.

Authors:  Yinglun Fan; Xiuyuan Wang; Haiyun Li; Shuang Liu; Liangshen Jin; Yanyan Lyu; Mengdi Shi; Sirui Liu; Xinyue Yang; Shanhua Lyu
Journal:  Plant Methods       Date:  2020-07-06       Impact factor: 4.993

  4 in total

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