Literature DB >> 15153036

Artificial genetic systems: exploiting the "aromaticity" formalism to improve the tautomeric ratio for isoguanosine derivatives.

Theodore A Martinot1, Steven A Benner.   

Abstract

The tautomerism of 2'-deoxy-7-deaza-isoguanosine (2) was studied and compared to that of 2'-deoxyisoguanosine (1). The fixed (1)N-methyl (8) and O-methyl (4) derivatives were synthesized to represent the pure extremes of each tautomer. The replacement of the imidazole ring in 1 with a pyrrole ring in 2 makes the keto form in the latter more favored by 2 orders of magnitude (K(TAUT) for 2 approximately 10(3), as opposed to K(TAUT) for 1 approximately 10).

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Year:  2004        PMID: 15153036     DOI: 10.1021/jo0497959

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  10 in total

Review 1.  Fluorescent analogs of biomolecular building blocks: design, properties, and applications.

Authors:  Renatus W Sinkeldam; Nicholas J Greco; Yitzhak Tor
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

2.  Eight-Letter DNA.

Authors:  Vivian T Dien; Matthew Holcomb; Floyd E Romesberg
Journal:  Biochemistry       Date:  2019-05-22       Impact factor: 3.162

3.  Tautomeric Equilibria of Nucleobases in the Hachimoji Expanded Genetic Alphabet.

Authors:  Lukas Eberlein; Frank R Beierlein; Nico J R van Eikema Hommes; Ashish Radadiya; Jochen Heil; Steven A Benner; Timothy Clark; Stefan M Kast; Nigel G J Richards
Journal:  J Chem Theory Comput       Date:  2020-03-20       Impact factor: 6.006

4.  Sequence determination of nucleic acids containing 5-methylisocytosine and isoguanine: identification and insight into polymerase replication of the non-natural nucleobases.

Authors:  J David Ahle; Stephen Barr; A Michael Chin; Thomas R Battersby
Journal:  Nucleic Acids Res       Date:  2005-06-02       Impact factor: 16.971

Review 5.  Auxotrophy to Xeno-DNA: an exploration of combinatorial mechanisms for a high-fidelity biosafety system for synthetic biology applications.

Authors:  Christopher M Whitford; Saskia Dymek; Denise Kerkhoff; Camilla März; Olga Schmidt; Maximilian Edich; Julian Droste; Boas Pucker; Christian Rückert; Jörn Kalinowski
Journal:  J Biol Eng       Date:  2018-08-14       Impact factor: 4.355

Review 6.  Synthetic biology.

Authors:  Steven A Benner; A Michael Sismour
Journal:  Nat Rev Genet       Date:  2005-07       Impact factor: 53.242

7.  Method for Rapid Analysis of Mutant RNA Polymerase Activity on Templates Containing Unnatural Nucleotides.

Authors:  Tatiana Egorova; Ekaterina Shuvalova; Sabina Mukba; Alexey Shuvalov; Peter Kolosov; Elena Alkalaeva
Journal:  Int J Mol Sci       Date:  2021-05-14       Impact factor: 5.923

Review 8.  Unnatural base pair systems toward the expansion of the genetic alphabet in the central dogma.

Authors:  Ichiro Hirao; Michiko Kimoto
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2012       Impact factor: 3.493

9.  Isoguanine and 5-methyl-isocytosine bases, in vitro and in vivo.

Authors:  Omprakash Bande; Rania Abu El Asrar; Darren Braddick; Shrinivas Dumbre; Valérie Pezo; Guy Schepers; Vitor B Pinheiro; Eveline Lescrinier; Philipp Holliger; Philippe Marlière; Piet Herdewijn
Journal:  Chemistry       Date:  2015-02-13       Impact factor: 5.236

Review 10.  Artificially Expanded Genetic Information Systems for New Aptamer Technologies.

Authors:  Elisa Biondi; Steven A Benner
Journal:  Biomedicines       Date:  2018-05-09
  10 in total

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