Literature DB >> 15133286

Retrotransposition of limited deletion type of intracisternal A-particle elements in the myeloid leukemia Clls of C3H/He mice.

Hiroshi Ishihara1, Izumi Tanaka, Hong Wan, Kumie Nojima, Kazuko Yoshida.   

Abstract

The murine genome has about 1,000 copies of DNA elements for the intracisternal A-particle (IAP) that resembles a retrovirus. We previously reported that the genomic DNA of the cells from radiation-induced acute myeloid leukemia (AML) lines derived from C3H/He inbred mice was frequently rearranged by the integration of the IAP element. In this study, 8 IAP elements from the characteristic integration sites in 6 cell lines of radiation-induced AML from different mice were characterized and compared in structure with 114 IAP elements isolated from the normal C3H/He genome. One of the 8 elements was a full-length type I IAP, and 7 were of type-I Delta 1 with a common deletion site. Although the type I Delta 1 form is a minor population accounting for about 6% of total genomic IAP elements, it is predominantly retrotransposed in the AML cells from different C3H/He mice. This indicates that limited populations of the IAP elements contribute to the unique retrotransposition in AML cells.

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Year:  2004        PMID: 15133286     DOI: 10.1269/jrr.45.25

Source DB:  PubMed          Journal:  J Radiat Res        ISSN: 0449-3060            Impact factor:   2.724


  12 in total

1.  The RNA transport element of the murine musD retrotransposon requires long-range intramolecular interactions for function.

Authors:  Michal Legiewicz; Andrei S Zolotukhin; Guy R Pilkington; Katarzyna J Purzycka; Michelle Mitchell; Hiroaki Uranishi; Jenifer Bear; George N Pavlakis; Stuart F J Le Grice; Barbara K Felber
Journal:  J Biol Chem       Date:  2010-10-26       Impact factor: 5.157

2.  Translation from nonautonomous type IAP retrotransposon is a critical determinant of transposition activity: implication for retrotransposon-mediated genome evolution.

Authors:  Ei-Suke Saito; Vincent W Keng; Junji Takeda; Kyoji Horie
Journal:  Genome Res       Date:  2008-05-02       Impact factor: 9.043

3.  Retrotransposons influence the mouse transcriptome: implication for the divergence of genetic traits.

Authors:  Kyoji Horie; Ei-Suke Saito; Vincent W Keng; Ryuji Ikeda; Hiroshi Ishihara; Junji Takeda
Journal:  Genetics       Date:  2007-04-15       Impact factor: 4.562

4.  DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes.

Authors:  Satomi Kuramochi-Miyagawa; Toshiaki Watanabe; Kengo Gotoh; Yasushi Totoki; Atsushi Toyoda; Masahito Ikawa; Noriko Asada; Kanako Kojima; Yuka Yamaguchi; Takashi W Ijiri; Kenichiro Hata; En Li; Yoichi Matsuda; Tohru Kimura; Masaru Okabe; Yoshiyuki Sakaki; Hiroyuki Sasaki; Toru Nakano
Journal:  Genes Dev       Date:  2008-04-01       Impact factor: 11.361

5.  Epigenetic regulation of a murine retrotransposon by a dual histone modification mark.

Authors:  Reinhard Brunmeir; Sabine Lagger; Elisabeth Simboeck; Anna Sawicka; Gerda Egger; Astrid Hagelkruys; Yu Zhang; Patrick Matthias; Wolfgang J Miller; Christian Seiser
Journal:  PLoS Genet       Date:  2010-04-29       Impact factor: 5.917

6.  Organization and evolution of a gene-rich region of the mouse genome: a 12.7-Mb region deleted in the Del(13)Svea36H mouse.

Authors:  Ann-Marie Mallon; Laurens Wilming; Joseph Weekes; James G R Gilbert; Jennifer Ashurst; Sandrine Peyrefitte; Lucy Matthews; Matthew Cadman; Richard McKeone; Chris A Sellick; Ruth Arkell; Marc R M Botcherby; Mark A Strivens; R Duncan Campbell; Simon Gregory; Paul Denny; John M Hancock; Jane Rogers; Steve D M Brown
Journal:  Genome Res       Date:  2004-09-13       Impact factor: 9.043

7.  IAP display: a simple method to identify mouse strain specific IAP insertions.

Authors:  Akshay Ray; Raheleh Rahbari; Richard M Badge
Journal:  Mol Biotechnol       Date:  2011-03       Impact factor: 2.695

8.  Retroviral elements and their hosts: insertional mutagenesis in the mouse germ line.

Authors:  Irina A Maksakova; Mark T Romanish; Liane Gagnier; Catherine A Dunn; Louie N van de Lagemaat; Dixie L Mager
Journal:  PLoS Genet       Date:  2006-01       Impact factor: 5.917

9.  Microarray-based global mapping of integration sites for the retrotransposon, intracisternal A-particle, in the mouse genome.

Authors:  Takashi Takabatake; Hiroshi Ishihara; Yasushi Ohmachi; Izumi Tanaka; Masako M Nakamura; Katsuyoshi Fujikawa; Tokuhisa Hirouchi; Shizuko Kakinuma; Yoshiya Shimada; Yoichi Oghiso; Kimio Tanaka
Journal:  Nucleic Acids Res       Date:  2008-05-01       Impact factor: 16.971

10.  Unraveling genetic modifiers in the gria4 mouse model of absence epilepsy.

Authors:  Wayne N Frankel; Connie L Mahaffey; Tracy C McGarr; Barbara J Beyer; Verity A Letts
Journal:  PLoS Genet       Date:  2014-07-10       Impact factor: 5.917

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